Morphological, genetic and mating diversity within the widespread bioindicator Nitzschia palea (Bacillariophyceae)

被引:122
|
作者
Trobajo, Rosa [1 ]
Clavero, Ester [2 ]
Chepurnov, Victor A. [2 ]
Sabbe, Koen [2 ]
Mann, David G. [3 ]
Ishihara, Satoru [4 ]
Cox, Eileen J. [1 ]
机构
[1] Nat Hist Museum, Dept Bot, London SW7 5BD, England
[2] Univ Ghent, Lab Protistol & Aquat Ecol, Dept Biol, B-9000 Ghent, Belgium
[3] Royal Bot Gardens, Edinburgh EH3 5LR, Midlothian, Scotland
[4] Natl Inst Agroenvironm Sci, Dept Environm Chem, Tsukuba, Ibaraki 3058604, Japan
关键词
Nitzschia palea; LSU rDNA; Diatoms; Cryptic diversity; Sexual reproduction; Morphology; COMPLEX BACILLARIOPHYCEAE; DIATOM COMMUNITIES; KATHMANDU VALLEY; TROPICAL RIVER; WATER-QUALITY; INDICATORS; RDNA; PHYTOPLANKTON; TAXONOMY; CLONES;
D O I
10.2216/08-69.1
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Nilzschia palea (Kiltzing) W. Smith is believed to be a widely distributed diatom and is common in various lotic and lentic freshwater habitats. However, it is also taxonomically problematic. As part of a multidisciplinary study of this diatom, 25 clones identified morphologically its N. palea were isolated from different freshwater habitats around the world (Belgium, Brazil, Egypt, India, Japan, Paraguay, Spain, Sri Lanka and the United Kingdom). Morphological and genetic diversity (using the hypervariable D1-D2 domains of LSU rDNA) were investigated, and an almost complete set of interclonal crossing experiments was carried out. Results indicate that N. palea is not it simple, homogeneous taxon and that N. palea will probably have to be split into three or more species. Molecular and mating groups do not separate along the traditional morphological boundaries among N. palea varieties, in particular between vars palea and debilis, two taxa that are commonly used to discriminate between different degrees of water Pollution. At least two of the putative species within the N. palea complex appear to be geographically widespread. Because of the complexity of variation revealed by the LSU, mating and morphometric data, it is clear that further work, using extra genetic markers and new isolates, will be needed to determine the full extent of cryptic and pseudocryptic speciation in N. palea and to investigate whether the segregate species are ecologically differentiated and have value as indicators.
引用
收藏
页码:443 / 459
页数:17
相关论文
共 50 条
  • [1] Genetic diversity of Pseudo-nitzschia brasiliana (Bacillariophyceae) from Malaysia
    Hong-Chang Lim
    Po-Teen Lim
    Suriyanti Nyun-Pau Su
    Sing-Tung Teng
    Chui-Pin Leaw
    Journal of Applied Phycology, 2012, 24 : 1465 - 1475
  • [2] Genetic diversity of Pseudo-nitzschia brasiliana (Bacillariophyceae) from Malaysia
    Lim, Hong-Chang
    Lim, Po-Teen
    Su, Suriyanti Nyun-Pau
    Teng, Sing-Tung
    Leaw, Chui-Pin
    JOURNAL OF APPLIED PHYCOLOGY, 2012, 24 (06) : 1465 - 1475
  • [3] Natural Hybrids in the Marine Diatom Pseudo-nitzschia pungens (Bacillariophyceae): Genetic and Morphological Evidence
    Casteleyn, Griet
    Adams, Nicolaus G.
    Vanormelingen, Pieter
    Debeer, Ann-Eline
    Sabbe, Koen
    Vyverman, Wim
    PROTIST, 2009, 160 (02) : 343 - 354
  • [4] The use of partial cox1, rbcL and LSU rDNA sequences for phylogenetics and species identification within the Nitzschia palea species complex (Bacillariophyceae)
    Trobajo, Rosa
    Mann, David G.
    Clavero, Ester
    Evans, Katharine M.
    Vanormelingen, Pieter
    McGregor, Ruth C.
    EUROPEAN JOURNAL OF PHYCOLOGY, 2010, 45 (04) : 413 - 425
  • [5] High levels of genetic diversity and low levels of genetic differentiation in North Sea Pseudo-nitzschia pungens (Bacillariophyceae) populations
    Evans, KM
    Kühn, SF
    Hayes, PK
    JOURNAL OF PHYCOLOGY, 2005, 41 (03) : 506 - 514
  • [6] Delimitation of Some Taxa of Ulnaria and Fragilaria (Bacillariophyceae) Based on Genetic, Morphological Data and Mating Compatibility
    Zakharova, Yulia
    Marchenkov, Artyom
    Petrova, Darya
    Bukin, Yurij
    Morozov, Aleksey
    Bedoshvili, Yekaterina
    Podunay, Yulia
    Davidovich, Olga
    Davidovich, Nikolai
    Bondar, Alexander
    Kahlert, Maria
    Likhoshway, Yelena
    DIVERSITY-BASEL, 2023, 15 (02):
  • [7] THE ITS2 GENETIC POLYMORPHISMS WITHIN PSEUDO-NITZSCHIA PUNGENS (BACILLARIOPHYCEAE) RESULTED FROM THE SEXUAL REPRODUCTION
    Kim, S. -H
    Kim, J. H.
    Kim, J. -H
    Park, B. S.
    Patidar, S. K.
    Han, M. -S
    PHYCOLOGIA, 2017, 56 (04) : 98 - 98
  • [8] Morphological and genetic variation within the widespread species Acacia victoriae (Mimosaceae)
    Ariati, Siti R.
    Murphy, Daniel J.
    Gardner, Stuart
    Ladiges, Pauline Y.
    AUSTRALIAN SYSTEMATIC BOTANY, 2007, 20 (01) : 54 - 62
  • [9] Development of a qPCR assay for tracking the ecological niches of genetic sub-populations within Pseudo-nitzschia pungens (Bacillariophyceae)
    Kim, Jin Ho
    Kim, Joo-Hwan
    Park, Bum Soo
    Wang, Pengbin
    Patidar, Shailesh Kumar
    Han, Myung-Soo
    HARMFUL ALGAE, 2017, 63 : 68 - 78
  • [10] Evidence for Morphological, Vegetative, Genetic, and Mating-Type Diversity in Sclerotinia homoeocarpa
    Liberti, Daniele
    Rollins, Jeffrey A.
    Harmon, Philip F.
    PHYTOPATHOLOGY, 2012, 102 (05) : 506 - 518