Candidate chemosensory genes identified in Colaphellus bowringi by antennal transcriptome analysis

被引:83
作者
Li, Xiao-Ming [1 ]
Zhu, Xiu-Yun [1 ]
Wang, Zhi-Qiang [1 ]
Wang, Yi [1 ]
He, Peng [2 ]
Chen, Geng [1 ]
Sun, Liang [3 ]
Deng, Dao-Gui [1 ]
Zhang, Ya-Nan [1 ]
机构
[1] Huaibei Normal Univ, Coll Life Sci, Huaibei 235000, Peoples R China
[2] Guizhou Univ, Key Lab Green Pesticide & Agr Bioengn, State Key Lab Breeding Base Green Pesticide & Agr, Minist Educ, Guiyang 550025, Peoples R China
[3] Chinese Acad Agr Sci, Tea Res Inst, Hangzhou 310008, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
Transcriptome analysis; Chemosensory gene; Antenna; Tissue expression; Cabbage beetle; ODORANT-BINDING-PROTEINS; SEX-PHEROMONE RECEPTORS; FUNCTIONAL-CHARACTERIZATION; MOLECULAR EVOLUTION; MAXIMUM-LIKELIHOOD; CABBAGE BEETLE; APIS-MELLIFERA; EXPRESSION; FAMILIES; MOTH;
D O I
10.1186/s12864-015-2236-3
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Since chemosensory genes play key roles in insect behaviour, they can potentially be used as new targets for pest control. The cabbage beetle, Colaphellus bowringi, is a serious insect pest of cruciferous vegetables in China and other Asian countries. However, a systematic identification of the chemosensory genes expressed in the antennae has not been reported. Results: We assembled the antennal transcriptome of C. bowringi by using Illumina sequencing technology and identified 104 candidate chemosensory genes by analyzing transcriptomic data, which included transcripts encoding 26 odorant-binding proteins (OBPs), 12 chemosensory proteins (CSPs), four sensory neuron membrane proteins (SNMPs), 43 odorant receptors (ORs), nine ionotropic receptors (IRs), and ten gustatory receptors (GRs). The data obtained are similar to those found in other coleopteran species, suggesting that our approach successfully identified the chemosensory genes of C. bowringi. The expression patterns of 43 OR genes, some of which were predominately found in the antenna or associated with sex-biased expression, were analyzed using quantitative real time RT-PCR (qPCR). Conclusions: Our study revealed that a large number of chemosensory genes are expressed in C. bowringi. These candidate chemosensory genes and their expression profiles in various tissues provide further information on understanding their function in C. bowringi as well as other insects, and identifying potential targets to disrupt the odorant system in C. bowringi so that new methods for pest management can be developed.
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页数:16
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