The complete mitochondrial genome of wild mung bean (Vigna radiata var. sublobata TC1966)

被引：1

作者：

Lin, Ching-Ping ^{[1
,2
]}

Schafleitner, Roland ^{[3
]}

Chen, Chien-Yu ^{[4
]}

Lo, Hsiao-Feng ^{[5
]}

Chen, Long-Fang Oliver ^{[1
]}

机构：

[1] Acad Sinica, Inst Plant & Microbial Biol, Taipei, Taiwan

[2] Univ Taipei, Dept Earth & Life Sci, Taipei, Taiwan

[3] World Vegetable Ctr, Biotechnol Mol Breeding, Tainan, Taiwan

[4] Natl Taiwan Univ, Dept Bioind Mechatron Engn, Taipei, Taiwan

[5] Natl Taiwan Univ, Dept Hort & Landscape Architecture, Taipei, Taiwan

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

关键词：

Wild mung bean; mitochondrial genome; Vigna radiata var; sublobata; domestication;

D O I：

10.1080/23802359.2019.1664953

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The entire mitogenome of wild mung bean (Vigna radiata var. sublobata TC1966) was identified as a circular molecule of 402,981 bp length. The wild mung bean mitogenome encoded 3 rRNAs, 16 tRNAs, and 33 proteins. A phylogenetic tree was reconstructed using the 18 protein-coding genes of 14 legumes and one close species, Ricinus communis. Our phylogenetic analysis suggests that the wild mung bean clustered with the Vigna radiata var. radiata, as well as, the species of Vigna and Glycine appeared as a monophyletic group. This complete mitogenome sequence provides a genomic resource for further studies in mung bean breeding and domestication.

引用

页码：3016 / 3017

页数：2

共 8 条

[1] The Mitochondrial Genome of the Legume Vigna radiata and the Analysis of Recombination across Short Mitochondrial Repeats [J].

Alverson, Andrew J. ;

Zhuo, Shi ;

Rice, Danny W. ;

Sloan, Daniel B. ;

Palmer, Jeffrey D. .

PLOS ONE, 2011, 6 (01)

[2] Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach [J].

Hahn, Christoph ;

Bachmann, Lutz ;

Chevreux, Bastien .

NUCLEIC ACIDS RESEARCH, 2013, 41 (13) :e129

[3]

Kumar S, 2016, MOL BIOL EVOL, V33, P1870, DOI [10.1093/molbev/msw054, 10.1093/molbev/msv279]

[4] The complete mitochondrial genome of mungbean Vigna radiata var. radiata NM92 and a phylogenetic analysis of crops in angiosperms [J].

Lin, Ching-Ping ;

Lo, Hsiao-Feng ;

Chen, Chien-Yu ;

Chen, Long-Fang Oliver .

MITOCHONDRIAL DNA PART A, 2016, 27 (05) :3731-3732

[5] Transcriptional Slippage and RNA Editing Increase the Diversity of Transcripts in Chloroplasts: Insight from Deep Sequencing of Vigna radiata Genome and Transcriptome [J].

Lin, Ching-Ping ;

Ko, Chia-Yun ;

Kuo, Ching-I ;

Liu, Mao-Sen ;

Schafleitner, Roland ;

Chen, Long-Fang Oliver .

PLOS ONE, 2015, 10 (06)

[6] The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs [J].

Schattner, P ;

Brooks, AN ;

Lowe, TM .

NUCLEIC ACIDS RESEARCH, 2005, 33 :W686-W689

[7] A review of phytochemistry, metabolite changes, and medicinal uses of the common food mung bean and its sprouts (Vigna radiata) [J].

Tang, Dongyan ;

Dong, Yinmao ;

Ren, Hankun ;

Li, Li ;

He, Congfen .

CHEMISTRY CENTRAL JOURNAL, 2014, 8

[8]

Tomooka N., 2002, The Asian Vigna: Genus Vigna subgenus Ceratotropis genetic resources, P270

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