Characterization of the complete mitochondrial genome of Pentatoma semiannulata (Hemiptera: Pentatomidae)

被引:9
作者
Wang, Juan [1 ]
Ji, Yutong [1 ]
Li, Hu [2 ]
Song, Fan [2 ]
Zhang, Lisheng [1 ]
Wang, Mengqing [1 ]
机构
[1] Chinese Acad Agr Sci, Inst Plant Protect, Beijing 100193, Peoples R China
[2] China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Dept Entomol, Beijing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 03期
基金
中国国家自然科学基金;
关键词
Mitochondrial genome; Heteroptera; Pentatominae; Pentatoma semiannulata;
D O I
10.1080/23802359.2021.1875912
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Pentatoma semiannulata is an important fruit pest in Chinese agricultural system. In current study, the complete mitochondrial genome of P. semiannulata is determined. This mitogenome is 15,515 bp in size and comprises of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a control region. Gene order is identical to that of the putative ancestral arrangement of insects. All protein-coding genes initiate with ATN, except for ATP8, COX1 and NAD1 use GTG or TTG as the start codon, and terminate with TAA with the exception for COX2 which uses a single T residue as the stop codon. All tRNAs, ranging from 62 to 72 bp, have the clover-leaf structure except for tRNA(Ser(AGN)) . The monophyly of Pentatomidae is highly supported by the phylogenetic tree and P. semiannulata is very close to other herbivorous species of the remaining Pentatomidae species.
引用
收藏
页码:750 / 752
页数:3
相关论文
共 13 条
[1]   Trimmomatic: a flexible trimmer for Illumina sequence data [J].
Bolger, Anthony M. ;
Lohse, Marc ;
Usadel, Bjoern .
BIOINFORMATICS, 2014, 30 (15) :2114-2120
[2]   Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny [J].
Cameron, Stephen L. .
ANNUAL REVIEW OF ENTOMOLOGY, VOL 59, 2014, 2014, 59 :95-117
[3]   Duplication and Remolding of tRNA Genes in the Mitochondrial Genome of Reduvius tenebrosus (Hemiptera: Reduviidae) [J].
Jiang, Pei ;
Li, Hu ;
Song, Fan ;
Cai, Yao ;
Wang, Jianyun ;
Liu, Jinpeng ;
Cai, Wanzhi .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2016, 17 (06)
[4]   IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era [J].
Minh, Bui Quang ;
Schmidt, Heiko A. ;
Chernomor, Olga ;
Schrempf, Dominik ;
Woodhams, Michael D. ;
von Haeseler, Arndt ;
Lanfear, Robert .
MOLECULAR BIOLOGY AND EVOLUTION, 2020, 37 (05) :1530-1534
[5]   IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth [J].
Peng, Yu ;
Leung, Henry C. M. ;
Yiu, S. M. ;
Chin, Francis Y. L. .
BIOINFORMATICS, 2012, 28 (11) :1420-1428
[6]  
Rider DA, 2018, HIGHER SYSTEMATICS P, P25, DOI [10.1201/9781315371221-2, DOI 10.1201/9781315371221-2]
[7]   Quality control and preprocessing of metagenomic datasets [J].
Schmieder, Robert ;
Edwards, Robert .
BIOINFORMATICS, 2011, 27 (06) :863-864
[8]   The first mitochondrial genome for the subfamily Podopinae (Hemiptera: Pentatomidae) and its phylogenetic implications [J].
Wang, Juan ;
Zhang, Li ;
Yang, Xing-Zhuo ;
Zhou, Min-Qiang ;
Yuan, Ming-Long .
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01) :219-220
[9]   Characterization of the complete mitochondrial genome ofArma custos(Hemiptera: Pentatomidae) [J].
Wu, Yunfei ;
Yang, Hailin ;
Zhou, Wenbing ;
Song, Fan ;
Cai, Wanzhi ;
Li, Hu .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03) :2624-2626
[10]   Novel gene rearrangement in the mitochondrial genome of Pachyneuron aphidis (Hymenoptera: Pteromalidae) [J].
Wu, Yunfei ;
Yang, Hailin ;
Feng, Zengbei ;
Li, Bingyan ;
Zhou, Wenbing ;
Song, Fan ;
Li, Hu ;
Zhang, Limeng ;
Cai, Wanzhi .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 149 :1207-1212