共 13 条
To sequence or not to sequence the whole-soil metagenome?
被引:25
作者:

Baveye, Philippe C.
论文数: 0 引用数: 0
h-index: 0
机构:
Abertay Univ, SIMBIOS Ctr, Dundee DD1 1HG, Scotland Abertay Univ, SIMBIOS Ctr, Dundee DD1 1HG, Scotland
机构:
[1] Abertay Univ, SIMBIOS Ctr, Dundee DD1 1HG, Scotland
关键词:
MICROBIAL COMMUNITIES;
ECOSYSTEMS;
D O I:
10.1038/nrmicro2119-c2
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
引用
收藏
页码:756 / 756
页数:1
相关论文
共 13 条
[1]
Metagenomics as a new technological tool to gain scientific knowledge
[J].
Guazzaroni, Maria-Eugenia
;
Beloqui, Ana
;
Golyshin, Peter N.
;
Ferrer, Manuel
.
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY,
2009, 25 (06)
:945-954

Guazzaroni, Maria-Eugenia
论文数: 0 引用数: 0
h-index: 0
机构:
CSIC, Inst Catalysis, Madrid 28049, Spain CSIC, Inst Catalysis, Madrid 28049, Spain

Beloqui, Ana
论文数: 0 引用数: 0
h-index: 0
机构:
CSIC, Inst Catalysis, Madrid 28049, Spain CSIC, Inst Catalysis, Madrid 28049, Spain

Golyshin, Peter N.
论文数: 0 引用数: 0
h-index: 0
机构:
Bangor Univ, Sch Biol Sci, Bangor LL57 2UW, Gwynedd, Wales
Bangor Univ Partnership, Aberystwyth Univ, Ctr Integrated Res Rural Environm, D-38124 Braunschweig, Germany
HZI Helmholtz Ctr Infect Res, Environm Microbiol Lab, D-38124 Braunschweig, Germany CSIC, Inst Catalysis, Madrid 28049, Spain

Ferrer, Manuel
论文数: 0 引用数: 0
h-index: 0
机构:
CSIC, Inst Catalysis, Madrid 28049, Spain CSIC, Inst Catalysis, Madrid 28049, Spain
[2]
Further biogeochemical characterization of a trichloroethene-contaminated fractured dolomite aquifer: Electron source and microbial communities involved in reductive dechlorination
[J].
Hohnstock-Ashe, AM
;
Plummer, SM
;
Yager, RM
;
Baveye, P
;
Madsen, EL
.
ENVIRONMENTAL SCIENCE & TECHNOLOGY,
2001, 35 (22)
:4449-4456

Hohnstock-Ashe, AM
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Microbiol, Ithaca, NY 14853 USA

Plummer, SM
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Microbiol, Ithaca, NY 14853 USA

Yager, RM
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Microbiol, Ithaca, NY 14853 USA

论文数: 引用数:
h-index:
机构:

Madsen, EL
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Microbiol, Ithaca, NY 14853 USA
[3]
Electron microprobe and synchrotron X-ray fluorescence mapping of the heterogeneous distribution of copper in high-copper vineyard soils
[J].
Jacobson, Astrid R.
;
Dousset, Sylvie
;
Andreux, Francis
;
Baveye, Philippe C.
.
ENVIRONMENTAL SCIENCE & TECHNOLOGY,
2007, 41 (18)
:6343-6349

Jacobson, Astrid R.
论文数: 0 引用数: 0
h-index: 0
机构:
Utah State Univ, Plants Soils & Climate Dept, Logan, UT 84322 USA Utah State Univ, Plants Soils & Climate Dept, Logan, UT 84322 USA

Dousset, Sylvie
论文数: 0 引用数: 0
h-index: 0
机构: Utah State Univ, Plants Soils & Climate Dept, Logan, UT 84322 USA

Andreux, Francis
论文数: 0 引用数: 0
h-index: 0
机构: Utah State Univ, Plants Soils & Climate Dept, Logan, UT 84322 USA

Baveye, Philippe C.
论文数: 0 引用数: 0
h-index: 0
机构: Utah State Univ, Plants Soils & Climate Dept, Logan, UT 84322 USA
[4]
High-resolution metagenomics targets specific functional types in complex microbial communities
[J].
Kalyuzhnaya, Marina G.
;
Lapidus, Alla
;
Ivanova, Natalia
;
Copeland, Alex C.
;
McHardy, Alice C.
;
Szeto, Ernest
;
Salamov, Asaf
;
Grigoriev, Igor V.
;
Suciu, Dominic
;
Levine, Samuel R.
;
Markowitz, Victor M.
;
Rigoutsos, Isidore
;
Tringe, Susannah G.
;
Bruce, David C.
;
Richardson, Paul M.
;
Lidstrom, Mary E.
;
Chistoserdova, Ludmila
.
NATURE BIOTECHNOLOGY,
2008, 26 (09)
:1029-1034

Kalyuzhnaya, Marina G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Washington, Dept Microbiol, Seattle, WA 98105 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Lapidus, Alla
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Ivanova, Natalia
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Copeland, Alex C.
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

McHardy, Alice C.
论文数: 0 引用数: 0
h-index: 0
机构:
IBM Thomas J Watson Res Ctr, Bioinformat & Pattern Discovery Grp, Yorktown Hts, NY 10598 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Szeto, Ernest
论文数: 0 引用数: 0
h-index: 0
机构:
Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Salamov, Asaf
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Grigoriev, Igor V.
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Suciu, Dominic
论文数: 0 引用数: 0
h-index: 0
机构:
Combimatrix Corp, Mukilteo, WA 98275 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Levine, Samuel R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Markowitz, Victor M.
论文数: 0 引用数: 0
h-index: 0
机构:
Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Rigoutsos, Isidore
论文数: 0 引用数: 0
h-index: 0
机构:
IBM Thomas J Watson Res Ctr, Bioinformat & Pattern Discovery Grp, Yorktown Hts, NY 10598 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Tringe, Susannah G.
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Bruce, David C.
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Los Alamos Natl Lab, Los Alamos, NM 87545 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Richardson, Paul M.
论文数: 0 引用数: 0
h-index: 0
机构:
DOE Joint Genome Inst, Prod Genom Facil, Walnut Creek, CA 94596 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Lidstrom, Mary E.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA
Univ Washington, Dept Microbiol, Seattle, WA 98105 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA

Chistoserdova, Ludmila
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA Univ Washington, Dept Chem Engn, Seattle, WA 98105 USA
[5]
Nanoscale biogeocomplexity of the organomineral assemblage in soil: Application of STXM microscopy and C 1s-NEXAFS spectroscopy
[J].
Kinyangi, James
;
Solomon, Dawit
;
Liang, Biqing
;
Lerotic, Mirna
;
Wirick, Sue
;
Lehmann, Johannes
.
SOIL SCIENCE SOCIETY OF AMERICA JOURNAL,
2006, 70 (05)
:1708-1718

Kinyangi, James
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA

Solomon, Dawit
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA

Liang, Biqing
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA

Lerotic, Mirna
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA

Wirick, Sue
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA

Lehmann, Johannes
论文数: 0 引用数: 0
h-index: 0
机构:
Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA Cornell Univ, Dept Crop & Soil Sci, Ithaca, NY 14853 USA
[6]
Modelling the impact of pore space distribution on carbon turnover
[J].
Kuka, K.
;
Franko, U.
;
Ruehlmann, J.
.
ECOLOGICAL MODELLING,
2007, 208 (2-4)
:295-306

Kuka, K.
论文数: 0 引用数: 0
h-index: 0
机构: UFZ Helmholtz Ctr Environm Res, Helmontz Ctr Envi Res Leipzig Halle, Dept Soil Phys, D-06120 Halle, Germany

Franko, U.
论文数: 0 引用数: 0
h-index: 0
机构: UFZ Helmholtz Ctr Environm Res, Helmontz Ctr Envi Res Leipzig Halle, Dept Soil Phys, D-06120 Halle, Germany

Ruehlmann, J.
论文数: 0 引用数: 0
h-index: 0
机构: UFZ Helmholtz Ctr Environm Res, Helmontz Ctr Envi Res Leipzig Halle, Dept Soil Phys, D-06120 Halle, Germany
[7]
Applicability of averaged concentrations in determining geochemical reaction rates in heterogeneous porous media
[J].
Li, Li
;
Peters, Catherine A.
;
Celia, Micael A.
.
AMERICAN JOURNAL OF SCIENCE,
2007, 307 (10)
:1146-1166

Li, Li
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Lawrence Berkeley Lab, Div Earth Sci, Berkeley, CA 94720 USA Univ Calif Berkeley, Lawrence Berkeley Lab, Div Earth Sci, Berkeley, CA 94720 USA

Peters, Catherine A.
论文数: 0 引用数: 0
h-index: 0
机构:
Princeton Univ, Dept Civil & Environm Engn, Princeton, NJ 08544 USA Univ Calif Berkeley, Lawrence Berkeley Lab, Div Earth Sci, Berkeley, CA 94720 USA

Celia, Micael A.
论文数: 0 引用数: 0
h-index: 0
机构:
Princeton Univ, Dept Civil & Environm Engn, Princeton, NJ 08544 USA Univ Calif Berkeley, Lawrence Berkeley Lab, Div Earth Sci, Berkeley, CA 94720 USA
[8]
Effect of microbial activity on trace element release from sewage sludge
[J].
Qureshi, S
;
Richards, BK
;
Hay, AG
;
Tsai, CC
;
McBride, MB
;
Baveye, P
;
Steenhuis, TS
.
ENVIRONMENTAL SCIENCE & TECHNOLOGY,
2003, 37 (15)
:3361-3366

Qureshi, S
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA

Richards, BK
论文数: 0 引用数: 0
h-index: 0
机构:
Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA

Hay, AG
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA

Tsai, CC
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA

McBride, MB
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA

论文数: 引用数:
h-index:
机构:

Steenhuis, TS
论文数: 0 引用数: 0
h-index: 0
机构: Cornell Univ, Dept Biol & Environm Engn, Ithaca, NY 14853 USA
[9]
Systems microbiology - Timeline - Molecular eco-systems biology: towards an understanding of community function
[J].
Raes, Jeroen
;
Bork, Peer
.
NATURE REVIEWS MICROBIOLOGY,
2008, 6 (09)
:693-699

Raes, Jeroen
论文数: 0 引用数: 0
h-index: 0
机构:
European Mol Biol Lab, D-69117 Heidelberg, Germany European Mol Biol Lab, D-69117 Heidelberg, Germany

Bork, Peer
论文数: 0 引用数: 0
h-index: 0
机构:
European Mol Biol Lab, D-69117 Heidelberg, Germany European Mol Biol Lab, D-69117 Heidelberg, Germany
[10]
Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms
[J].
Rondon, MR
;
August, PR
;
Bettermann, AD
;
Brady, SF
;
Grossman, TH
;
Liles, MR
;
Loiacono, KA
;
Lynch, BA
;
MacNeil, IA
;
Minor, C
;
Tiong, CL
;
Gilman, M
;
Osburne, MS
;
Clardy, J
;
Handelsman, J
;
Goodman, RM
.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY,
2000, 66 (06)
:2541-2547

Rondon, MR
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

August, PR
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Bettermann, AD
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Brady, SF
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Grossman, TH
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Liles, MR
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Loiacono, KA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Lynch, BA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

MacNeil, IA
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Minor, C
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Tiong, CL
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Gilman, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Osburne, MS
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Clardy, J
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Handelsman, J
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA

Goodman, RM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA