NMR studies on metal complexes of DNA oligomers

被引:7
作者
Andersen, B [1 ]
Sletten, E [1 ]
机构
[1] Univ Bergen, Dept Chem, N-5007 Bergen, Norway
关键词
nuclear magnetic resonance spectroscopy; oligonucleotides; metal complexes; transplatin; cross-links;
D O I
10.1016/S0162-0134(99)00230-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A short overview of NMR spectroscopic applications for the study of metal ion complexes of DNA oligomers is presented. One typical example is given to illustrate the scope of the methods: the NMR structure of a trans-DDP interstrand cross-linked duplex, d(CTCCTG*TGTCTC) .d(GAGATA*AGGAG). The solution structure of this double-stranded DNA oligonucleotide, containing a trans-diammineplatinum(II) interstrand cross-link, was determined using two-dimensional nuclear magnetic resonance (2D NMR) and NOE-restrained molecular dynamics and energy minimization refinement. The duplex is a non-palindromic 12/11-mer with a missing central residue in the lower strand and in addition it contains a GT mismatched base pair. The analysis indicated that an interstrand cross-link is established between G6-N7 of the upper strand and A18-N1 of the lower strand. (C) 2000 Elsevier Science Inc. All rights reserved.
引用
收藏
页码:353 / 358
页数:6
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