Super-Resolution Ultrasound Localization Microscopy Through Deep Learning

被引:119
作者
van Sloun, Ruud J. G. [1 ]
Solomon, Oren [2 ,3 ]
Bruce, Matthew [4 ]
Khaing, Zin Z. [5 ]
Wijkstra, Hessel [1 ,6 ]
Eldar, Yonina C. [7 ]
Mischi, Massimo [1 ]
机构
[1] Eindhoven Univ Technol, Dept Elect Engn, NL-5612 AZ Eindhoven, Netherlands
[2] Techion Israel Inst Technol, Dept Elect Engn, IL-3200003 Haifa, Israel
[3] Univ Minnesota, Ctr Magnet Resonance Res, Dept Radiol, Minneapolis, MN 55455 USA
[4] Univ Washington, Appl Phys Lab, Seattle, WA 98195 USA
[5] Univ Washington, Dept Neurol Surg, Seattle, WA 98195 USA
[6] Univ Amsterdam, Acad Med Ctr, Dept Urol, NL-1012 WX Amsterdam, Netherlands
[7] Weizmann Inst Sci, Fac Math & Comp Sci, IL-7610001 Rehovot, Israel
基金
荷兰研究理事会;
关键词
Ultrasound; deep learning; super resolution; ultrasound localization microscopy; neural network; ACOUSTIC SUPERRESOLUTION; IN-VIVO; MICROVASCULATURE;
D O I
10.1109/TMI.2020.3037790
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Ultrasound localization microscopy has enabled super-resolution vascular imaging through precise localization of individual ultrasound contrast agents (microbubbles) across numerous imaging frames. However, analysis of high-density regions with significant overlaps among the microbubble point spread responses yields high localization errors, constraining the technique to low-concentration conditions. As such, long acquisition times are required to sufficiently cover the vascular bed. In this work, we present a fast and precise method for obtaining super-resolution vascular images from high-density contrast-enhanced ultrasound imaging data. This method, which we term Deep Ultrasound Localization Microscopy (Deep-ULM), exploits modern deep learning strategies and employs a convolutional neural network to perform localization microscopy in dense scenarios, learning the nonlinear image-domain implications of overlapping RF signals originating from such sets of closely spaced microbubbles. Deep-ULM is trained effectively using realistic on-line synthesized data, enabling robust inference in-vivo under a wide variety of imaging conditions. We show that deep learning attains super-resolution with challenging contrast-agent densities, both in-silico as well as in-vivo. Deep-ULM is suitable for real-time applications, resolving about 70 high-resolution patches (128 x 128 pixels) per second on a standard PC. Exploiting GPU computation, this number increases to 1250 patches per second.
引用
收藏
页码:829 / 839
页数:11
相关论文
共 40 条
[1]   Detection and Tracking of Multiple Microbubbles in Ultrasound B-Mode Images [J].
Ackermann, Dimitri ;
Schmitz, Georg .
IEEE TRANSACTIONS ON ULTRASONICS FERROELECTRICS AND FREQUENCY CONTROL, 2016, 63 (01) :72-82
[2]  
[Anonymous], 2018, ARXIV180403134
[3]   SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation [J].
Badrinarayanan, Vijay ;
Kendall, Alex ;
Cipolla, Roberto .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2017, 39 (12) :2481-2495
[4]   SUSHI: Sparsity-Based Ultrasound Super-Resolution Hemodynamic Imaging [J].
Bar-Zion, Avinoam ;
Solomon, Oren ;
Tremblay-Darveau, Charles ;
Adam, Dan ;
Eldar, Yonina C. .
IEEE TRANSACTIONS ON ULTRASONICS FERROELECTRICS AND FREQUENCY CONTROL, 2018, 65 (12) :2365-2380
[5]   Fast Vascular Ultrasound Imaging With Enhanced Spatial Resolution and Background Rejection [J].
Bar-Zion, Avinoam ;
Tremblay-Darveau, Charles ;
Solomon, Oren ;
Adam, Dan ;
Eldar, Yonina C. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2017, 36 (01) :169-180
[6]   Three-dimensional imaging of microvasculature in the rat spinal cord following injury [J].
Cao, Yong ;
Wu, Tianding ;
Yuan, Zhou ;
Li, Dongzhe ;
Ni, Shuangfei ;
Hu, Jianzhong ;
Lu, Hongbin .
SCIENTIFIC REPORTS, 2015, 5
[7]   Low-Dose CT With a Residual Encoder-Decoder Convolutional Neural Network [J].
Chen, Hu ;
Zhang, Yi ;
Kalra, Mannudeep K. ;
Lin, Feng ;
Chen, Yang ;
Liao, Peixi ;
Zhou, Jiliu ;
Wang, Ge .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2017, 36 (12) :2524-2535
[8]  
Cheng Y., 2017, ARXIV
[9]  
CHIN CT, 2001, THESIS U TORONTO TOR
[10]   In Vivo Acoustic Super-Resolution and Super-Resolved Velocity Mapping Using Microbubbles [J].
Christensen-Jeffries, Kirsten ;
Browning, Richard J. ;
Tang, Meng-Xing ;
Dunsby, Christopher ;
Eckersley, Robert J. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2015, 34 (02) :433-440