Bridging from single to collective cell migration: A review of models and links to experiments

被引:53
作者
Buttenschon, Andreas [1 ]
Edelstein-Keshet, Leah [1 ]
机构
[1] Univ British Columbia, Dept Math, Vancouver, BC, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
NEURAL CREST MIGRATION; RHO-FAMILY-GTPASES; CONTACT INHIBITION; ACTIN DYNAMICS; LEADING-EDGE; MORPHOGENESIS; MULTISCALE; MOVEMENT; GUIDANCE; POLARITY;
D O I
10.1371/journal.pcbi.1008411
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Author summary In this review paper, we summarize the literature on computational models for cell motility, from the biochemical networks that regulate it, to the behavior of 1 and many cells. We discuss the distinct approaches used at each level, and how models can build bridges between the different size scales. We find models at many different levels of biological detail, and discuss their relative contributions to our understanding of single and collective cell behavior. Finally, we indicate how models have been linked to biological experiments in this field. Mathematical and computational models can assist in gaining an understanding of cell behavior at many levels of organization. Here, we review models in the literature that focus on eukaryotic cell motility at 3 size scales: intracellular signaling that regulates cell shape and movement, single cell motility, and collective cell behavior from a few cells to tissues. We survey recent literature to summarize distinct computational methods (phase-field, polygonal, Cellular Potts, and spherical cells). We discuss models that bridge between levels of organization, and describe levels of detail, both biochemical and geometric, included in the models. We also highlight links between models and experiments. We find that models that span the 3 levels are still in the minority.
引用
收藏
页数:34
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共 185 条
[51]   Computational Analysis of Rho GTPase Cycling [J].
Falkenberg, Cibele Vieira ;
Loew, Leslie M. .
PLOS COMPUTATIONAL BIOLOGY, 2013, 9 (01)
[52]   Vertex Models of Epithelial Morphogenesis [J].
Fletcher, Alexander G. ;
Osterfield, Miriam ;
Baker, Ruth E. ;
Shvartsman, Stanislav Y. .
BIOPHYSICAL JOURNAL, 2014, 106 (11) :2291-2304
[53]   Implementing vertex dynamics models of cell populations in biology within a consistent computational framework [J].
Fletcher, Alexander G. ;
Osborne, James M. ;
Maini, Philip K. ;
Gavaghan, David J. .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2013, 113 (02) :299-326
[54]   A Computational Model for Collective Cellular Motion in Three Dimensions: General Framework and Case Study for Cell Pair Dynamics [J].
Frascoli, Federico ;
Hughes, Barry D. ;
Zaman, Muhammad H. ;
Landman, Kerry A. .
PLOS ONE, 2013, 8 (03)
[55]   Collective cell migration in morphogenesis, regeneration and cancer [J].
Friedl, Peter ;
Gilmour, Darren .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2009, 10 (07) :445-457
[56]   SIMULATION OF BIOLOGICAL CELL SORTING USING A 2-DIMENSIONAL EXTENDED POTTS-MODEL [J].
GRANER, F ;
GLAZIER, JA .
PHYSICAL REVIEW LETTERS, 1992, 69 (13) :2013-2016
[57]   Analysis of actin dynamics at the leading edge of crawling cells: implications for the shape of keratocyte lamellipodia [J].
Grimm, HP ;
Verkhovsky, AB ;
Mogilner, A ;
Meister, JJ .
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2003, 32 (06) :563-577
[58]   Collective cell migration: guidance principles and hierarchies [J].
Haeger, Anna ;
Wolf, Katarina ;
Zegers, Mirjam M. ;
Friedl, Peter .
TRENDS IN CELL BIOLOGY, 2015, 25 (09) :556-566
[59]   Rho GTPases and the actin cytoskeleton [J].
Hall, A .
SCIENCE, 1998, 279 (5350) :509-514
[60]   Rho GTPases: molecular switches that control the organization and dynamics of the actin cytoskeleton [J].
Hall, A ;
Nobes, CD .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2000, 355 (1399) :965-970