Multicenter Evaluation of the Cepheid Xpert Xpress SARS-CoV-2/Flu/RSV Test

被引:65
作者
Mostafa, Heba H. [1 ]
Carroll, Karen C. [1 ]
Hicken, Rachel [1 ]
Berry, Gregory J. [2 ]
Manji, Ryhana [2 ]
Smith, Elizabeth [2 ]
Rakeman, Jennifer L. [3 ]
Fowler, Randal C. [3 ]
Leelawong, Mindy [3 ]
Butler-Wu, Susan M. [4 ]
Quintero, David [4 ]
Umali-Wilcox, Minette [4 ]
Kwiatkowski, Robert W. [5 ]
Persing, David H. [5 ]
Weir, Fred [5 ]
Loeffelholz, Michael J. [5 ]
机构
[1] Johns Hopkins Univ, Sch Med, Baltimore, MD USA
[2] Zucker SOM Hofstra Northwell, Northwell Hlth Labs, East Garden City, NY USA
[3] NYC Publ Hlth Lab, Dept Hlth & Mental Hyg, New York, NY USA
[4] Keck Sch Med USC, Dept Pathol, Los Angeles, CA USA
[5] Cepheid, Sunnyvale, CA 94089 USA
关键词
Cepheid; SARS-CoV-2; influenza; flu; RSV; 4-plex; INFLUENZA-VIRUS;
D O I
10.1128/JCM.02955-20
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
With the approach of respiratory virus season in the Northern Hemisphere, clinical microbiology and public health laboratories will need rapid diagnostic assays to distinguish severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) from influenza virus and respiratory syncytial virus (RSV) infections for diagnosis and surveillance. In this study, the clinical performance of the Xpert Xpress SARS-CoV-2/Flu/RSV test (Cepheid, Sunnyvale, CA, USA) for nasopharyngeal swab specimens was evaluated in four centers: Johns Hopkins Medical Microbiology Laboratory, Northwell Health Laboratories, NYC Public Health Laboratory, and Los Angeles County/University of Southern California (LAC1USC) Medical Center. A total of 319 nasopharyngeal swab specimens, positive for SARS- CoV-2 (n = 75), influenza A virus (n = 65), influenza B virus (n = 50), or RSV (n = 38) or negative (n = 91) by the standard-of-care nucleic acid amplification tests at each site, were tested using the Cepheid panel test. The overall positive percent agreement for the SARS-CoV-2 target was 98.7% (n = 74/75), and the negative agreement was 100% (n = 91), with all other analytes showing 100% total agreement (n = 153). Standard-of-care tests to which the Cepheid panel was compared included the Cepheid Xpert Xpress SARS-CoV-2, Cepheid Xpert Xpress Flu/RSV, GenMark ePlex respiratory panel, BioFire respiratory panel 2.1 and v1.7, DiaSorin Simplexa COVID-19 Direct, and Hologic Panther Fusion SARS-CoV-2 assays. The Xpert Xpress SARS-CoV-2/Flu/RSV test showed high sensitivity and accuracy for all analytes included in the test. This test will provide a valuable clinical diagnostic and public health solution for detecting and differentiating SARS-CoV-2, influenza A and B virus, and RSV infections during the current respiratory virus season.
引用
收藏
页数:7
相关论文
共 42 条
[41]   Clinical Evaluation of Three Sample-to-Answer Platforms for Detection of SARS-CoV-2 [J].
Zhen, Wei ;
Smith, Elizabeth ;
Manji, Ryhana ;
Schron, Deborah ;
Berry, Gregory J. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2020, 58 (08)
[42]   Co-infection of SARS-CoV-2 and Influenza virus in Early Stage of the COVID-19 Epidemic in Wuhan, China [J].
Zheng, Xin ;
Wang, Hua ;
Su, Zhengyuan ;
Li, Wei ;
Yang, Dongliang ;
Deng, Fei ;
Chen, Jianjun .
JOURNAL OF INFECTION, 2020, 81 (02) :E128-E129