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Multicenter Evaluation of the Cepheid Xpert Xpress SARS-CoV-2/Flu/RSV Test
被引:65
作者:
Mostafa, Heba H.
[1
]
Carroll, Karen C.
[1
]
Hicken, Rachel
[1
]
Berry, Gregory J.
[2
]
Manji, Ryhana
[2
]
Smith, Elizabeth
[2
]
Rakeman, Jennifer L.
[3
]
Fowler, Randal C.
[3
]
Leelawong, Mindy
[3
]
Butler-Wu, Susan M.
[4
]
Quintero, David
[4
]
Umali-Wilcox, Minette
[4
]
Kwiatkowski, Robert W.
[5
]
Persing, David H.
[5
]
Weir, Fred
[5
]
Loeffelholz, Michael J.
[5
]
机构:
[1] Johns Hopkins Univ, Sch Med, Baltimore, MD USA
[2] Zucker SOM Hofstra Northwell, Northwell Hlth Labs, East Garden City, NY USA
[3] NYC Publ Hlth Lab, Dept Hlth & Mental Hyg, New York, NY USA
[4] Keck Sch Med USC, Dept Pathol, Los Angeles, CA USA
[5] Cepheid, Sunnyvale, CA 94089 USA
关键词:
Cepheid;
SARS-CoV-2;
influenza;
flu;
RSV;
4-plex;
INFLUENZA-VIRUS;
D O I:
10.1128/JCM.02955-20
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
With the approach of respiratory virus season in the Northern Hemisphere, clinical microbiology and public health laboratories will need rapid diagnostic assays to distinguish severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) from influenza virus and respiratory syncytial virus (RSV) infections for diagnosis and surveillance. In this study, the clinical performance of the Xpert Xpress SARS-CoV-2/Flu/RSV test (Cepheid, Sunnyvale, CA, USA) for nasopharyngeal swab specimens was evaluated in four centers: Johns Hopkins Medical Microbiology Laboratory, Northwell Health Laboratories, NYC Public Health Laboratory, and Los Angeles County/University of Southern California (LAC1USC) Medical Center. A total of 319 nasopharyngeal swab specimens, positive for SARS- CoV-2 (n = 75), influenza A virus (n = 65), influenza B virus (n = 50), or RSV (n = 38) or negative (n = 91) by the standard-of-care nucleic acid amplification tests at each site, were tested using the Cepheid panel test. The overall positive percent agreement for the SARS-CoV-2 target was 98.7% (n = 74/75), and the negative agreement was 100% (n = 91), with all other analytes showing 100% total agreement (n = 153). Standard-of-care tests to which the Cepheid panel was compared included the Cepheid Xpert Xpress SARS-CoV-2, Cepheid Xpert Xpress Flu/RSV, GenMark ePlex respiratory panel, BioFire respiratory panel 2.1 and v1.7, DiaSorin Simplexa COVID-19 Direct, and Hologic Panther Fusion SARS-CoV-2 assays. The Xpert Xpress SARS-CoV-2/Flu/RSV test showed high sensitivity and accuracy for all analytes included in the test. This test will provide a valuable clinical diagnostic and public health solution for detecting and differentiating SARS-CoV-2, influenza A and B virus, and RSV infections during the current respiratory virus season.
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