Sensitivity of the power-law exponent in gene expression distribution to mRNA decay rate

被引:8
作者
Nacher, J. C. [1 ]
Akutsu, T. [1 ]
机构
[1] Kyoto Univ, Inst Chem Res, Bioinformat Ctr, Uji 6110011, Japan
关键词
stochastic process; scaling-law; gene expression; Ito-Stratonovich calculus;
D O I
10.1016/j.physleta.2006.07.076
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Large-scale acquisition technologies in mRNA abundance (gene expression) have provided new opportunities to better understand many complex biological processes. Lately, it has been reported that the observed gene expression data in several organisms significantly deviates from a Poisson distribution and follows a power-law or fat-tailed distribution. Here, we show that a simple stochastic model of gene expression with intrinsic and extrinsic noise derives the stationary power-law distribution using the Stratonovich calculus. Furthermore, we connect the experimental measure of the power-law exponent with the value of the mRNA decay. Finally, we compare the results with other models where stochastic equations were used within the Ito interpretation. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:174 / 178
页数:5
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