COMP 8-Multiplexed replica exchange molecular dynamics simulations of protein folding with a physics-based coarse-grained force field

被引：0
|
作者：
Czaplewski, Czarek [1 ]
Kalinowski, Sebastian [1 ]
Liwo, Adam [1 ]
Oldziej, Stanislaw [1 ]
Scheraga, Harold A. [1 ]
机构：
[1] Cornell Univ, Baker Lab, Dept Chem & Chem Biol, Ithaca, NY 14853 USA
来源：
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY | 2008年 / 235卷
关键词：
D O I：
暂无
中图分类号：
O6 [化学];
学科分类号：
0703 ;
摘要：
8-COMP
引用
收藏
页数：1
相关论文
共 50 条
  • [1] PHYS 179-Dynamics of protein folding by massively parallel simulations with a physics-based coarse-grained force field
    Liwo, Adam
    Oldziej, Stanislaw
    Czaplewski, Czarek
    Maisuradze, Gia
    Scheraga, Harold A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 235
  • [2] Investigation of Protein Folding by Coarse-Grained Molecular Dynamics with the UNRES Force Field
    Maisuradze, Gia G.
    Senet, Patrick
    Czaplewski, Cezary
    Liwo, Adam
    Scheraga, Harold A.
    JOURNAL OF PHYSICAL CHEMISTRY A, 2010, 114 (13) : 4471 - 4485
  • [3] Replica Exchange Molecular Dynamics Simulations of Coarse-grained Proteins in Implicit Solvent
    Chebaro, Yassmine
    Dong, Xiao
    Laghaei, Rozita
    Derreumaux, Philippe
    Mousseau, Normand
    JOURNAL OF PHYSICAL CHEMISTRY B, 2009, 113 (01) : 267 - 274
  • [4] PHYS 22-Folding dynamics with a physics-based coarse-grained united-residue (UNRES) force field
    Liwo, Adam
    Oldziej, Stanislaw
    Czaplewski, Cezary
    Murarka, Rajesh K.
    Rojas, Ana
    Maisuradze, Gia
    Scheraga, Harold A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 236
  • [5] UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamics
    Czaplewski, Cezary
    Karczynska, Agnieszka
    Sieradzan, Adam K.
    Liwo, Adam
    NUCLEIC ACIDS RESEARCH, 2018, 46 (W1) : W304 - W309
  • [6] Coarse-grained protein molecular dynamics simulations
    Derreumaux, Philippe
    Mousseau, Normand
    JOURNAL OF CHEMICAL PHYSICS, 2007, 126 (02)
  • [7] A Generic Force Field for Protein Coarse-Grained Molecular Dynamics Simulation
    Gu, Junfeng
    Bai, Fang
    Li, Honglin
    Wang, Xicheng
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2012, 13 (11): : 14451 - 14469
  • [8] A coarse-grained protein force field for folding and structure prediction
    Maupetit, Julien
    Tuffery, P.
    Derreumaux, Philippe
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2007, 69 (02) : 394 - 408
  • [9] PHYS 700-Use of coarse-grained Langevin dynamics to extract folding times from replica exchange simulations
    Garcia, Angel E.
    Yang, Sichun
    Paschek, Dietmar
    Onuchic, Jose N.
    Levine, Herbert
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 235
  • [10] Protein folding simulations: combining coarse-grained models and all-atom molecular dynamics
    Colombo, Giorgio
    Micheletti, Cristian
    THEORETICAL CHEMISTRY ACCOUNTS, 2006, 116 (1-3) : 75 - 86
12345