Single cell sequencing: a distinct new field

被引:48
作者
Wang, Jian [1 ]
Song, Yuanlin [1 ]
机构
[1] Fudan Univ, Zhongshan Hosp, Dept Pulm Med, Shanghai 200030, Peoples R China
基金
中国国家自然科学基金;
关键词
CIRCULATING TUMOR-CELLS; COPY-NUMBER VARIATION; WHOLE-GENOME AMPLIFICATION; MESSENGER-RNA-SEQ; BREAST-CANCER; METHYLOME LANDSCAPES; DNA-POLYMERASE; REVEALS; ANEUPLOIDY; TECHNOLOGIES;
D O I
10.1186/s40169-017-0139-4
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Single cell sequencing (SCS) has become a new approach to study biological heterogeneity. The advancement in technologies for single cell isolation, amplification of genome/transcriptome and next-generation sequencing enables SCS to reveal the inherent properties of a single cell from the large scale of the genome, transcriptome or epigenome at high resolution. Recently, SCS has been widely applied in various clinical and research fields, such as cancer biology and oncology, immunology, microbiology, neurobiology and prenatal diagnosis. In this review, we will discuss the development of SCS methods and focus on the latest clinical and research applications of SCS.
引用
收藏
页数:11
相关论文
共 120 条
[1]   Circulating Cancer-Associated Macrophage-Like Cells Differentiate Malignant Breast Cancer and Benign Breast Conditions [J].
Adams, Daniel L. ;
Adams, Diane K. ;
Alpaugh, R. Katherine ;
Cristofanilli, Massimo ;
Martin, Stuart S. ;
Chumsri, Saranya ;
Tang, Cha-Mei ;
Marks, Jeffrey R. .
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2016, 25 (07) :1037-1042
[2]  
Aliotta JM, 1996, GENET ANAL-BIOMOL E, V12, P185
[3]   Single Virus Genomics: A New Tool for Virus Discovery [J].
Allen, Lisa Zeigler ;
Ishoey, Thomas ;
Novotny, Mark A. ;
McLean, Jeffrey S. ;
Lasken, Roger S. ;
Williamson, Shannon J. .
PLOS ONE, 2011, 6 (03)
[4]   Levitation and movement of human tumor cells using a printed circuit board device based on software-controlled dielectrophoresis [J].
Altomare, L ;
Borgatti, M ;
Medoro, G ;
Manaresi, N ;
Tartagni, M ;
Guerrieri, R ;
Gambari, R .
BIOTECHNOLOGY AND BIOENGINEERING, 2003, 82 (04) :474-479
[5]  
[Anonymous], 2016, CELL MOL LIFE SCI
[6]  
Arneson N, 2008, CSH PROTOC, V2008
[7]   Signal amplification of padlock probes by rolling circle replication [J].
Banér, J ;
Nilsson, M ;
Mendel-Hartvig, M ;
Landegren, U .
NUCLEIC ACIDS RESEARCH, 1998, 26 (22) :5073-5078
[8]   Single cell sequencing approaches for complex biological systems [J].
Baslan, Timour ;
Hicks, James .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2014, 26 :59-65
[9]   An estimation of the number of cells in the human body [J].
Bianconi, Eva ;
Piovesan, Allison ;
Facchin, Federica ;
Beraudi, Alina ;
Casadei, Raffaella ;
Frabetti, Flavia ;
Vitale, Lorenza ;
Pelleri, Maria Chiara ;
Tassani, Simone ;
Piva, Francesco ;
Perez-Amodio, Soledad ;
Strippoli, Pierluigi ;
Canaider, Silvia .
ANNALS OF HUMAN BIOLOGY, 2013, 40 (06) :463-471
[10]   Single-cell microbiology: Tools, technologies, and applications [J].
Brehm-Stecher, BF ;
Johnson, EA .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2004, 68 (03) :538-+