Nonlabens aestuariivivens sp nov., isolated from a tidal flat

被引:3
作者
Park, Sooyeon [1 ]
Ha, Min-Ji [1 ]
Yoon, Sun Young [1 ]
Jung, Yong-Taek [1 ,2 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
[2] Univ Sci & Technol, 113 Gwahak Ro, Daejeon, South Korea
关键词
tidal flat; polyphasic taxonomy; novel species; Nonlabens aestuariivivens sp nov; FAMILY FLAVOBACTERIACEAE; GEN.-NOV; BACTERIAL SYSTEMATICS; EMENDED DESCRIPTION; MEMBER; PERSICIVIRGA; STENOTHERMOBACTER; IDENTIFICATION; TEGETINCOLA; SEDIMENT;
D O I
10.1099/ijsem.0.001750
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, non-flagellated, non-gliding, aerobic and rod-shaped bacterium, designated strain OITF-31(T), was isolated from a tidal flat in Oido, an island of South Korea, and subjected to a polyphasic taxonomic study. Strain OITF-31(T) grew optimally at 30 degrees C, at pH 7.0-8.0 and in the presence of 1.0-2.0% (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences revealed that strain OITF-31(T) belonged to the genus Nonlabens, clustering with the type strains of Nonlabens dokdonensis and Nonlabens xylanidelens, sharing 98.1% sequence similarity with each. Strain OITF-31(T) exhibited 16S rRNA gene sequence similarities of 93.9-95.8% to the type strains of other Nonlabens species and less than of 91.8% to the type strains of other recognized species. Strain OITF-31(T) contained MK-6 as the predominant menaquinone and iso-C-17:0 3-OH and iso-C-15:0 as the major fatty acids. The major polar lipids detected in strain OITF-31(T) were phosphatidylethanolamine, six unidentified lipids and two unidentified aminolipids. The DNA G+C content of strain OITF-31(T) was 38.1 mol% and its mean DNA-DNA relatedness values with the type strains of N. dokdonensis and N. xylanidelens were 24 and 19 %, respectively. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain OITF-31(T) is separated from recognized species of the genus Nonlabens. On the basis of the data presented, strain OITF-31(T) is considered to represent a novel species of the genus Nonlabens, for which the name Nonlabens aestuariivivens sp. nov. is proposed. The type strain is OITF-31(T) (= KCTC 52502(T) =NBRC 112459(T)).
引用
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页码:1535 / 1539
页数:5
相关论文
共 30 条
[1]   Persicivirga ulvanivorans sp nov., a marine member of the family Flavobacteriaceae that degrades ulvan from green algae [J].
Barbeyron, Tristan ;
Lerat, Yannick ;
Sassi, Jean-Francois ;
Le Panse, Sophie ;
Helbert, William ;
Collen, Pi Nyvall .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 :1899-1905
[2]  
Barrow GI., 1993, COWAN STEELS MANUAL, V3th
[3]  
Bernardet J.-F., 2011, BERGEYS MANUAL SYSTE, V4, P106
[4]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[5]   Description of Cellulophaga algicola sp nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. [J].
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1861-1868
[6]   Muricauda ruestringensis gen. nov., sp nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment [J].
Bruns, A ;
Rohde, M ;
Berthe-Corti, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1997-2006
[7]  
Embley T. Martin, 1994, P121
[8]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[9]   Sandalrakinotalea sediminis gen. nov., sp nov., a novel member of the family Flavobacteriaceae [J].
Khan, ST ;
Nakagawa, Y ;
Harayama, S .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 :959-963
[10]  
KOMAGATA K, 1987, METHOD MICROBIOL, V19, P161