The rhizosphere microbiome is composed of diverse microbial organisms, including archaea, viruses, fungi, bacteria as well as eukaryotic microorganisms, which occupy a narrow region of soil directly associated with plant roots. The interactions between these microorganisms and the plant can be commensal, beneficial or pathogenic. These microorganisms can also interact with each other, either competitively or synergistically. Promoting plant growth by harnessing the soil microbiome holds tremendous potential for providing an environmentally friendly solution to the increasing food demands of the world's rapidly growing population, while also helping to alleviate the associated environmental and societal issues of large-scale food production. There recently have been many studies on the disease suppression and plant growth promoting abilities of the rhizosphere microbiome; however, these findings largely have not been translated into the field. Therefore, additional research into the dynamic interactions between crop plants, the rhizosphere microbiome and the environment are necessary to better guide the harnessing of the microbiome to increase crop yield and quality. This review explores the biotic and abiotic interactions that occur within the plant's rhizosphere as well as current agricultural practices, and how these biotic and abiotic factors, as well as human practices, impact the plant microbiome. Additionally, some limitations, safety considerations, and future directions to the study of the plant microbiome are discussed.
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USACold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Lindsay, Penelope
Swentowsky, Kyle W.
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Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USACold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Swentowsky, Kyle W.
Jackson, David
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Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Hubei, Peoples R ChinaCold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
机构:
Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Rodriguez, Patricia A.
Rothballer, Michael
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Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Rothballer, Michael
Chowdhury, Soumitra Paul
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Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Chowdhury, Soumitra Paul
Nussbaumer, Thomas
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Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Tech Univ Munich, UNIKA T, IEM, Augsburg, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Nussbaumer, Thomas
Gutjahr, Caroline
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TUM, TUM Sch Life Sci Weihenstephan, Plant Genet, Freising Weihenstephan, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
Gutjahr, Caroline
Falter-Braun, Pascal
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Helmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
LMU, Fac Biol, Microbe Host Interact, Munich, GermanyHelmholtz Zentrum Munchen, German Res Ctr Environm Hlth, Inst Network Biol INET, Munich, Germany
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United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
Mishra, Ajay Kumar
Sudalaimuthuasari, Naganeeswaran
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United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
Sudalaimuthuasari, Naganeeswaran
Hazzouri, Khaled M.
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United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
Hazzouri, Khaled M.
Saeed, Esam Eldin
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United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
Saeed, Esam Eldin
Shah, Iltaf
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United Arab Emirates Univ, Coll Sci, Dept Chem Biochem, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
Shah, Iltaf
Amiri, Khaled M. A.
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United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
United Arab Emirates Univ, Coll Sci, Dept Biol, POB 15551, Al Ain, U Arab EmiratesUnited Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, POB 15551, Al Ain, U Arab Emirates
机构:
Shandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R ChinaShandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R China
Gao, Yaru
Zou, Hong
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Shandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R ChinaShandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R China
Zou, Hong
Wang, Baoshan
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Shandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R ChinaShandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R China
Wang, Baoshan
Yuan, Fang
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Shandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R ChinaShandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Plant Stress, Jinan 250014, Peoples R China