The complete mitochondrial genome sequence of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability

被引:111
作者
Fenn, J. D. [1 ]
Cameron, S. L.
Whiting, M. F.
机构
[1] Brigham Young Univ, Dept Integrat Biol, Provo, UT 84602 USA
[2] Black Mt Labs, CSIRO, Div Entomol, Australian Natl Insect Collect, Canberra, ACT, Australia
关键词
Anabrus simplex; Orthoptera; mitochondria; control region; mRNA processing;
D O I
10.1111/j.1365-2583.2006.00721.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Anabrus simplex is a swarming plague orthopteran found in western North America. The genome is 15 766 bp in length and genome organization follows the ancestral insect gene arrangement. atp6 lacked any readily identifiable stop codon. Examination of mRNA secondary structure for this gene suggested a stem/loop-mediated mRNA post-transcriptional processing to liberate a mature atp6 mRNA with a complete stop codon produced by polyadenylation. Comparison of similar protein with protein gene boundaries in other insect species reveal a general mechanism for mRNA excision and provide further supporting evidence for post-transcriptional mRNA processing in mitochondrial genomes. The A + T-rich region, or control region, was sequenced for 55 A. simplex individuals from 12 different populations. Variance studies between these individuals show that the A + T-rich region contains significant phylogenetic signal to be used in population studies.
引用
收藏
页码:239 / 252
页数:14
相关论文
共 47 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]  
[Anonymous], 2002, MOL BIOL EVOL
[3]   INTRASPECIFIC PHYLOGEOGRAPHY - THE MITOCHONDRIAL-DNA BRIDGE BETWEEN POPULATION-GENETICS AND SYSTEMATICS [J].
AVISE, JC ;
ARNOLD, J ;
BALL, RM ;
BERMINGHAM, E ;
LAMB, T ;
NEIGEL, JE ;
REEB, CA ;
SAUNDERS, NC .
ANNUAL REVIEW OF ECOLOGY AND SYSTEMATICS, 1987, 18 :489-522
[4]   Are solitary and gregarious Mormon crickets (Anabrus simplex, Orthoptera, Tettigoniidae) genetically distinct? [J].
Bailey, NW ;
Gwynne, DT ;
Ritchie, MG .
HEREDITY, 2005, 95 (02) :166-173
[5]   Comparative genomics of mitochondrial DNA in members of the Drosophila melanogaster subgroup [J].
Ballard, JWO .
JOURNAL OF MOLECULAR EVOLUTION, 2000, 51 (01) :48-63
[6]   SEQUENCE AND GENE ORGANIZATION OF MOUSE MITOCHONDRIAL-DNA [J].
BIBB, MJ ;
VANETTEN, RA ;
WRIGHT, CT ;
WALBERG, MW ;
CLAYTON, DA .
CELL, 1981, 26 (02) :167-180
[7]   Animal mitochondrial genomes [J].
Boore, JL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (08) :1767-1780
[8]   Evolution of the mitochondrial DNA control region in the Anopheles gambiae complex [J].
Caccone, A ;
Garcia, BA ;
Powell, JR .
INSECT MOLECULAR BIOLOGY, 1996, 5 (01) :51-59
[9]   Mitochondrial genome data alone are not enough to unambiguously resolve the relationships of Entognatha, Insecta and Crustacea sensu lato (Arthropoda) [J].
Cameron, SL ;
Miller, KB ;
D'Haese, CA ;
Whiting, MF ;
Barker, SC .
CLADISTICS, 2004, 20 (06) :534-557
[10]   THE MITOCHONDRIAL-DNA MOLECULE OF DROSOPHILA-YAKUBA - NUCLEOTIDE-SEQUENCE, GENE ORGANIZATION, AND GENETIC-CODE [J].
CLARY, DO ;
WOLSTENHOLME, DR .
JOURNAL OF MOLECULAR EVOLUTION, 1985, 22 (03) :252-271