Extracellular oxidative systems of the lignin-degrading Basidiomycete Phanerochaete chrysosporium

被引:237
作者
Kersten, Phil [1 ]
Cullen, Dan [1 ]
机构
[1] USDA, Forest Prod Lab, 1 Gifford Pinchot Dr, Madison, WI 53705 USA
关键词
Phanerochaete chrysosporium; oxidases; copper radical oxidases; multicopper oxidases; WHITE-ROT BASIDIOMYCETE; ENCODING CELLOBIOSE DEHYDROGENASE; MANGANESE-DEPENDENT PEROXIDASE; ARYL-ALCOHOL OXIDASE; GLYOXAL OXIDASE; DIFFERENTIAL REGULATION; MULTICOPPER OXIDASE; TRAMETES-VERSICOLOR; MOLECULAR-BIOLOGY; BINDING-SITE;
D O I
10.1016/j.fgb.2006.07.007
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The US Department of Energy has assembled a high quality draft genome of Phanerochaele chrysosporium, a white rot Basidiomycete capable of completely degrading all major components of plant cell walls including cellulose, hemicellulose and lignin. Hundreds of sequences are predicted to encode extracellular enzymes including an impressive number of oxidative enzymes potentially involved in lignocellulose degradation. Herein, we summarize the number, organization, and expression of genes encoding peroxidases, copper radical oxidases, FAD-dependent oxidases, and multicopper oxidases. Possibly relevant to extracellular oxidative systems are genes involved in posttranslational processes and a large number of hypothetical proteins. Published by Elsevier Inc.
引用
收藏
页码:77 / 87
页数:11
相关论文
共 152 条
  • [1] Fungal degradation of wood:: initial proteomic analysis of extracellular proteins of Phanerochaete chrysosporium grown on oak substrate
    Abbas, A
    Koc, H
    Liu, F
    Tien, M
    [J]. CURRENT GENETICS, 2005, 47 (01) : 49 - 56
  • [2] Characterization of the gene encoding manganese peroxidase isozyme 3 from Phanerochaete chrysosporium
    Alic, M
    Akileswaran, L
    Gold, MH
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1997, 1338 (01): : 1 - 7
  • [3] ALIC M, 1991, MORE GENE MANIPULATI, P319
  • [4] Site-directed mutagenesis of the yeast multicopper oxidase Fet3p
    Askwith, CC
    Kaplan, J
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (35) : 22415 - 22419
  • [5] EVIDENCE FOR THE INVOLVEMENT OF ACTIVATED OXYGEN IN FUNGAL DEGRADATION OF LIGNOCELLULOSE
    BES, B
    RANJEVA, R
    BOUDET, AM
    [J]. BIOCHIMIE, 1983, 65 (4-5) : 283 - 289
  • [6] Using GeneWise in the Drosophila annotation experiment
    Birney, E
    Durbin, R
    [J]. GENOME RESEARCH, 2000, 10 (04) : 547 - 548
  • [7] DELIGNIFICATION BY WOOD-DECAY FUNGI
    BLANCHETTE, RA
    [J]. ANNUAL REVIEW OF PHYTOPATHOLOGY, 1991, 29 : 381 - 398
  • [8] Autocatalytic formation of a hydroxy group at Cβ of Trp171 in lignin peroxidase
    Blodig, W
    Doyle, WA
    Smith, AT
    Winterhalter, K
    Choinowski, T
    Piontek, K
    [J]. BIOCHEMISTRY, 1998, 37 (25) : 8832 - 8838
  • [9] Manganese peroxidase mRNA and enzyme activity levels during bioremediation of polycyclic aromatic hydrocarbon-contaminated soil with Phanerochaete chrysosporium
    Bogan, BW
    Schoenike, B
    Lamar, RT
    Cullen, D
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (07) : 2381 - 2386
  • [10] Expression of lip genes during growth in soil and oxidation of anthracene by Phanerochaete chrysosporium
    Bogan, BW
    Schoenike, B
    Lamar, RT
    Cullen, D
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (10) : 3697 - 3703