Improved molecular detection of mosaicism in Beckwith-Wiedemann Syndrome

被引:23
作者
Baker, Samuel W. [1 ]
Duffy, Kelly A. [2 ]
Richards-Yutz, Jennifer [1 ]
Deardorff, Matthew A. [2 ,3 ]
Kalish, Jennifer M. [2 ,3 ]
Ganguly, Arupa [1 ]
机构
[1] Univ Penn, Perelman Sch Med, Dept Genet, Philadelphia, PA 19104 USA
[2] Childrens Hosp Philadelphia, Div Human Genet, Philadelphia, PA 19104 USA
[3] Univ Penn, Dept Pediat, Perelman Sch Med, Philadelphia, PA 19104 USA
关键词
genetics; diagnostics; imprinting; clinical genetics; epigenetics;
D O I
10.1136/jmedgenet-2019-106498
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background Beckwith-Wiedemann Syndrome (BWS) is characterised by overgrowth and tumour predisposition. While multiple epigenetic and genetic mechanisms cause BWS, the majority are caused by methylation defects in imprinting control regions on chromosome 11p15.5. Disease-causing methylation defects are often mosaic within affected individuals. Phenotypic variability among individuals with chromosome 11p15.5 defects and tissue mosaicism led to the definition of the Beckwith-Wiedemann Spectrum (BWSp). Molecular diagnosis of BWSp requires use of multiple sensitive diagnostic techniques to reliably detect low-level aberrations. Methods Multimodal BWS diagnostic testing was performed on samples from 1057 individuals. Testing included use of a sensitive qRT-PCR-based quantitation method enabling identification of low-level mosaic disease, identification of CNVs within 11p15.5 via array comparative genomic hybridisation or qRT-PCR, and Sanger sequencing of CDKN1C. Results A molecular diagnosis was confirmed for 27.4% of individuals tested, of whom 43.4% had mosaic disease. The presence of a single cardinal feature was associated with a molecular diagnosis of BWSp in 20% of cases. Additionally, significant differences in the prevalence of mosaic disease among BWS molecular subtypes were identified. Finally, the diagnostic yield obtained by testing solid tissue samples from individuals with negative blood testing results shows improved molecular diagnosis. Conclusion This study highlights the prevalence of mosaic disease among individuals with BWSp and the increases in diagnostic yield obtained via testing both blood and solid tissue samples from affected individuals. Additionally, the results establish the presence of a molecular diagnosis in individuals with very subtle features of BWSp.
引用
收藏
页码:178 / 184
页数:7
相关论文
共 35 条
[1]   Methylation analysis in tongue tissue of BWS patients identifies the (EPI)genetic cause in 3 patients with normal methylation levels in blood [J].
Alders, Marielle ;
Maas, Saskia M. ;
Kadouch, Daniel J. M. ;
van der Lip, Karin ;
Bliek, Jet ;
van der Horst, Chantal M. A. M. ;
Mannens, Marcel M. A. M. .
EUROPEAN JOURNAL OF MEDICAL GENETICS, 2014, 57 (06) :293-297
[2]   Beckwith-Wiedemann and Russell-Silver Syndromes: from new molecular insights to the comprehension of imprinting regulation [J].
Azzi, Salah ;
Habib, Walid Abi ;
Netchine, Irene .
CURRENT OPINION IN ENDOCRINOLOGY DIABETES AND OBESITY, 2014, 21 (01) :30-38
[3]   Allele-Specific Methylated Multiplex Real-Time Quantitative PCR (ASMM RTQ-PCR), a Powerful Method for Diagnosing Loss of Imprinting of the 11p15 Region in Russell Silver and Beckwith Wiedemann Syndromes [J].
Azzi, Salah ;
Steunou, Virginie ;
Rousseau, Alexandra ;
Rossignol, Sylvie ;
Thibaud, Nathalie ;
Danton, Fabienne ;
Le Jule, Marilyne ;
Gicquel, Christine ;
Le Bouc, Yves ;
Netchine, Irene .
HUMAN MUTATION, 2011, 32 (02) :249-258
[4]   Multilocus methylation analysis in a large cohort of 11p15-related foetal growth disorders (Russell Silver and Beckwith Wiedemann syndromes) reveals simultaneous loss of methylation at paternal and maternal imprinted loci [J].
Azzi, Salah ;
Rossignol, Sylvie ;
Steunou, Virginie ;
Sas, Theo ;
Thibaud, Nathalie ;
Danton, Fabienne ;
Le Jule, Maryline ;
Heinrichs, Claudine ;
Cabrol, Sylvie ;
Gicquel, Christine ;
Le Bouc, Yves ;
Netchine, Irene .
HUMAN MOLECULAR GENETICS, 2009, 18 (24) :4724-4733
[5]   Profiling DNA Methylation Based on Next-Generation Sequencing Approaches: New Insights and Clinical Applications [J].
Barros-Silva, Daniela ;
Joana Marques, C. ;
Henrique, Rui ;
Jeronimo, Carmen .
GENES, 2018, 9 (09)
[6]   High frequency of copy number variations (CNVs) in the chromosome 11p15 region in patients with Beckwith-Wiedemann syndrome [J].
Baskin, Berivan ;
Choufani, Sanaa ;
Chen, Yi-an ;
Shuman, Cheryl ;
Parkinson, Nicole ;
Lemyre, Emmanuelle ;
Innes, A. Micheil ;
Stavropoulos, Dimitri J. ;
Ray, Peter N. ;
Weksberg, Rosanna .
HUMAN GENETICS, 2014, 133 (03) :321-330
[7]   Clinical and molecular diagnosis, screening and management of Beckwith-Wiedemann syndrome: an international consensus statement [J].
Brioude, Frederic ;
Kalish, Jennifer M. ;
Mussa, Alessandro ;
Foster, Alison C. ;
Bliek, Jet ;
Ferrero, Giovanni Battista ;
Boonen, Susanne E. ;
Cole, Trevor ;
Baker, Robert ;
Bertoletti, Monica ;
Cocchi, Guido ;
Coze, Carole ;
De Pellegrin, Maurizio ;
Hussain, Khalid ;
Ibrahim, Abdulla ;
Kilby, Mark D. ;
Krajewska-Walasek, Malgorzata ;
Kratz, Christian P. ;
Ladusans, Edmund J. ;
Lapunzina, Pablo ;
Le Bouc, Yves ;
Maas, Saskia M. ;
Macdonald, Fiona ;
Ounap, Katrin ;
Peruzzi, Licia ;
Rossignol, Sylvie ;
Russo, Silvia ;
Shipster, Caroleen ;
Skorka, Agata ;
Tatton-Brown, Katrina ;
Tenorio, Jair ;
Tortora, Chiara ;
Gronskov, Karen ;
Netchine, Irene ;
Hennekam, Raoul C. ;
Prawitt, Dirk ;
Tumer, Zeynep ;
Eggermann, Thomas ;
Mackay, Deborah J. G. ;
Riccio, Andrea ;
Maher, Eamonn R. .
NATURE REVIEWS ENDOCRINOLOGY, 2018, 14 (04) :229-249
[8]   Beckwith-Wiedemann Syndrome [J].
Choufani, Sanaa ;
Shuman, Cheryl ;
Weksberg, Rosanna .
AMERICAN JOURNAL OF MEDICAL GENETICS PART C-SEMINARS IN MEDICAL GENETICS, 2010, 154C (03) :343-354
[9]   Mechanisms of mosaicism, chimerism and uniparental disomy identified by single nucleotide polymorphism array analysis [J].
Conlin, Laura K. ;
Thiel, Brian D. ;
Bonnemann, Carsten G. ;
Medne, Livija ;
Ernst, Linda M. ;
Zackai, Elaine H. ;
Deardorff, Matthew A. ;
Krantz, Ian D. ;
Hakonarson, Hakon ;
Spinner, Nancy B. .
HUMAN MOLECULAR GENETICS, 2010, 19 (07) :1263-1275
[10]   Molecular subtypes and phenotypic expression of Beckwith-Wiedemann syndrome [J].
Cooper, WN ;
Luharia, A ;
Evans, GA ;
Raza, H ;
Haire, AC ;
Grundy, R ;
Bowdin, SC ;
Riccio, A ;
Sebastio, G ;
Bliek, J ;
Schofield, PN ;
Reik, W ;
Macdonald, F ;
Maher, ER .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2005, 13 (09) :1025-1032