Kinetics of the helix-coil transition

被引:5
|
作者
Allahverdyan, A. E. [1 ]
Gevorkian, S. G. [1 ]
Simonian, A. [2 ]
机构
[1] Yerevan Phys Inst, Yerevan 375036, Armenia
[2] Auburn Univ, Mat Res & Educ Ctr, Auburn, AL 36849 USA
关键词
TIME-DEPENDENT STATISTICS; ATOM MODEL SIMULATION; ISING-BASED THEORY; GLASS-TRANSITION; COLLAGEN; THERMODYNAMICS; POLYPEPTIDES; TEMPERATURE; HYSTERESIS; STABILITY;
D O I
10.1209/0295-5075/86/53002
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Based on the Zimm-Bragg model we study cooperative helix-coil transition driven by a finite-speed change of temperature. There is an asymmetry between the coil. helix and helix. coil transition: the latter is displayed already for finite speeds, and takes shorter time than the former. This hysteresis effect has been observed experimentally, and it is explained here via quantifying system's stability in the vicinity of the critical temperature. A finite-speed cooling induces a non-equilibrium helical phase with the correlation length larger than in equilibrium. In this phase the characteristic length of the coiled domain and the non-equilibrium specific heat can display an anomalous response to temperature changes. Several pertinent experimental results on the kinetics of helical biopolymers are discussed in detail. Copyright (C) EPLA, 2009
引用
收藏
页数:6
相关论文
共 50 条
  • [1] KINETICS OF HELIX-COIL TRANSITION OF POLYPEPTIDES
    ISHIWARI, K
    NAKAJIMA, A
    MACROMOLECULES, 1978, 11 (04) : 785 - 792
  • [2] KINETICS OF HELIX-COIL TRANSITION IN DNA
    RECORD, MT
    ZIMM, BH
    BIOPOLYMERS, 1972, 11 (07) : 1435 - &
  • [3] KINETICS OF HELIX-COIL TRANSITION IN POLYAMINO ACIDS
    POLAND, D
    SCHERAGA, HA
    JOURNAL OF CHEMICAL PHYSICS, 1966, 45 (06): : 2071 - &
  • [5] Universal kinetics of helix-coil transition in gelatin
    Gornall, J. L.
    Terentjev, E. M.
    PHYSICAL REVIEW E, 2008, 77 (03):
  • [6] Effect of viscosity on the kinetics of the helix-coil transition.
    Jas, GS
    Muñoz, V
    Hofrichter, J
    Eaton, WA
    BIOPHYSICAL JOURNAL, 1999, 76 (01) : A175 - A175
  • [7] CRITICAL-POINT IN KINETICS OF HELIX-COIL TRANSITION
    CHAY, TR
    JOURNAL OF POLYMER SCIENCE PART C-POLYMER LETTERS, 1974, 12 (10) : 597 - 600
  • [8] KINETICS OF HELIX-COIL TRANSITION IN ALL SIZES OF POLYPEPTIDES
    CHAY, TR
    STEVENS, CL
    MACROMOLECULES, 1975, 8 (04) : 531 - 535
  • [9] The helix-coil kinetics of a heteropeptide
    Thompson, PA
    Muñoz, V
    Jas, GS
    Henry, ER
    Eaton, WA
    Hofrichter, J
    JOURNAL OF PHYSICAL CHEMISTRY B, 2000, 104 (02): : 378 - 389
  • [10] The helix-coil transition revisited
    Chen, Yantao
    Zhou, Yaoqi
    Ding, Jiandong
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2007, 69 (01) : 58 - 68