Successful Strategy for High Degree of Freedom Crystal Structure Determination from Powder X-Ray Diffraction Data: A Case Study for Selexipag Form I with 38 DOF

被引:13
作者
Husak, Michal [1 ]
Jegorov, Alexandr [2 ]
Czernek, Jiri [3 ]
Rohlicek, Jan [1 ]
Zizkova, Simona [1 ]
Vraspir, Pavel [4 ]
Kolesa, Pavel [4 ]
Fitch, Andrew [5 ]
Brus, Jiri [3 ]
机构
[1] Univ Chem Technol Prague, Dept Solid State Chem, Prague 16628 6, Czech Republic
[2] Teva Pharmaceut CR Sro, Branisovska 31, Ceske Budejovice 37005, Czech Republic
[3] Czech Acad Sci, Inst Macromol Chem, Heyrovsky Sq 2, Prague 16206 6, Czech Republic
[4] Teva Pharmaceut CR Sro, Ostravska 29, Opava 74770, Czech Republic
[5] ESRF European Synchrotron, Struct Mat Grp, ID22, CS40220, F-38043 Grenoble 9, France
关键词
SOLID-STATE NMR; STRUCTURE PREDICTION; BORONIC ACID; CRYSTALLOGRAPHY; SPECTROSCOPY; ABSENCE; CITRATE;
D O I
10.1021/acs.cgd.9b00517
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The determination of crystal structures from powder X-ray diffraction (PXRD) data by using direct-space methods is significantly limited by the degrees of conformational freedom (DOF). This limit currently lies between 30 and 40 DOF. Novel strategies are thus continuously being developed to allow an increase in DOF while keeping computational time reasonable. In our contribution, we demonstrate the solution of the crystal structure of selexipag, a drug for the treatment of pulmonary arterial hypertension (PAH), from PXRD data using synchrotron radiation. With 38 DOF, this structure is one of the most complex organic molecular structures that was actually solved ab initio from powder diffraction data. As the structure solution problem was on the edge of the current methodological possibilities, we applied an advanced strategy using a combination of restraints from the Cambridge Structural Database (CSD), optimized simulated annealing (SA) parameters, and parallel code execution, all complemented by DFT-D calculations and analysis of solid-state NMR (ss-NMR) parameters. Thus, we present here a novel integrated approach that applies several techniques in conjunction to provide otherwise unavailable structural information.
引用
收藏
页码:4625 / 4631
页数:7
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