Effects of Natural Osmolytes on the Protein Structure in Supercritical CO2: Molecular Level Evidence

被引:50
作者
Monhemi, Hassan [1 ]
Housaindokht, Mohammad Reza [1 ]
Pour, Ali Nakhaei [1 ]
机构
[1] Ferdowsi Univ Mashhad, Res & Technol Ctr Biomol, Fac Sci, Mashhad, Iran
基金
美国国家科学基金会;
关键词
ANTARCTICA LIPASE B; CARBON-DIOXIDE; HYDROPHOBIC INTERACTIONS; BIOCATALYTIC SYNTHESIS; COMPRESSED FLUIDS; ORGANIC OSMOLYTES; STABILIZATION; MECHANISM; WATER; HYDRATION;
D O I
10.1021/acs.jpcb.5b03970
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Protein instability in supercritical CO, limits the application Of this green solvent in enzyme-catalyzed reactions. CO2 molecules at as a protein denaturant at high pressure under supercritical conditions. Here, for the first time, we show that natural osmolytes could stabilize protein conformation in supercritical CO2. Molecular dynamics simulation is used to monitor the effects of adding different natural osmolytes on the conformation and dynamics Of chymotrypsin inhibitor 2 (CI2) in supercritical CO2. Simulations showed that CI2 is denatured at 200 bar in supercritical CO2, which is in agreement with experimental observations. Interestingly, the protein conformation remains native after addition of similar to 1 M amino, acid- and sugar-based osmolyte models. These molecules stabilize protein through the formation of supramolecular self-assemblies resulting from macromolecule osmolyte hydrogen bonds. Nevertheless, trimethylamine N-oxide, which is known as a potent osmolyte for protein stabilization in aqueous solutions, amplifies protein denaturation in supercritical CO2. On the basis of our structural analysis, we introduce a new mechanism for the osmolyte effect in supercritical CO2, an "inclusion mechanism". To the best of our knowledge, this is the first study that introduces the application of natural osmolytes in a supercritical fluid and describes mechanistic insights into osmolyte action in nonaqueous media.
引用
收藏
页码:10406 / 10416
页数:11
相关论文
共 64 条
[51]   ENZYMATIC CATALYSIS IN A SUPERCRITICAL FLUID [J].
RANDOLPH, TW ;
BLANCH, HW ;
PRAUSNITZ, JM ;
WILKE, CR .
BIOTECHNOLOGY LETTERS, 1985, 7 (05) :325-328
[52]   Exploring the Molecular Mechanism of Trimethylamine-N-oxide's Ability to Counteract the Protein Denaturing Effects of Urea [J].
Sarma, Rahul ;
Paul, Sandip .
JOURNAL OF PHYSICAL CHEMISTRY B, 2013, 117 (18) :5691-5704
[53]   GENERAL ATOMIC AND MOLECULAR ELECTRONIC-STRUCTURE SYSTEM [J].
SCHMIDT, MW ;
BALDRIDGE, KK ;
BOATZ, JA ;
ELBERT, ST ;
GORDON, MS ;
JENSEN, JH ;
KOSEKI, S ;
MATSUNAGA, N ;
NGUYEN, KA ;
SU, SJ ;
WINDUS, TL ;
DUPUIS, M ;
MONTGOMERY, JA .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1993, 14 (11) :1347-1363
[54]   The GROMOS biomolecular simulation program package [J].
Scott, WRP ;
Hünenberger, PH ;
Tironi, IG ;
Mark, AE ;
Billeter, SR ;
Fennen, J ;
Torda, AE ;
Huber, T ;
Krüger, P ;
van Gunsteren, WF .
JOURNAL OF PHYSICAL CHEMISTRY A, 1999, 103 (19) :3596-3607
[55]   Enzyme Microheterogeneous Hydration and Stabilization in Supercritical Carbon Dioxide [J].
Silveira, Rodrigo L. ;
Martinez, Julian ;
Skaf, Munir S. ;
Martinez, Leandro .
JOURNAL OF PHYSICAL CHEMISTRY B, 2012, 116 (19) :5671-5678
[56]   Strategies for Stabilization of Enzymes in Organic Solvents [J].
Stepankova, Veronika ;
Bidmanova, Sarka ;
Koudelakova, Tana ;
Prokop, Zbynek ;
Chaloupkova, Radka ;
Damborsky, Jiri .
ACS CATALYSIS, 2013, 3 (12) :2823-2836
[57]  
Street TO, 2006, P NATL ACAD SCI USA, V103, P13997, DOI 10.1073/pnas.0606236103
[58]   Enzymatic Synthesis of Dipalmitin in Supercritical Carbon Dioxide and Mechanism Study [J].
Tao, Minli ;
Li, Qian ;
Qu, Jiazheng ;
Zhang, Minhua .
INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH, 2013, 52 (38) :13528-13535
[59]   Osmolyte Counteracts Urea-Induced Denaturation of α-Chymotrypsin [J].
Venkatesu, Pannur ;
Lee, Ming-Jer ;
Lin, Ho-mu .
JOURNAL OF PHYSICAL CHEMISTRY B, 2009, 113 (15) :5327-5338
[60]   Organic osmolytes as compatible, metabolic and counteracting cytoprotectants in high osmolarity and other stresses [J].
Yancey, PH .
JOURNAL OF EXPERIMENTAL BIOLOGY, 2005, 208 (15) :2819-2830