Genome Sequence of Staphylococcus epidermidis AUH4567, a Clinical Isolate from an Infected Central Venous Catheter

被引:2
作者
Meyer, Rikke Louise [1 ,2 ]
Skovdal, Sandra M. [1 ,3 ,5 ]
Marshall, Ian P. G. [2 ]
Schreiber, Lars [2 ]
Norskov-Lauritsen, Niels [4 ,6 ]
Jorgensen, Nis Pedersen [1 ,3 ]
机构
[1] Aarhus Univ, Interdisciplinary Nanosci Ctr, Aarhus, Denmark
[2] Aarhus Univ, Dept Biol, Aarhus, Denmark
[3] Aarhus Univ Hosp, Dept Infect Dis, Aarhus, Denmark
[4] Aarhus Univ Hosp, Dept Clin Microbiol, Aarhus, Denmark
[5] Randers Reg Hosp, Dept Med, Randers, Denmark
[6] Univ Southern Denmark, Dept Clin Res, Odense, Denmark
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2021年 / 10卷 / 12期
基金
欧洲研究理事会;
关键词
D O I
10.1128/MRA.01254-20
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Staphylococcus epidermidis is a common cause of implant-associated infections, and this is related to its ability to form biofilms. Strain-to-strain variability in biofilm formation is likely caused by genetic differences. Here, we present a draft genome of S. epidermidis AUH4567, which was isolated from a central venous catheter infection.
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页数:2
相关论文
共 5 条
[1]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[2]   Trimmomatic: a flexible trimmer for Illumina sequence data [J].
Bolger, Anthony M. ;
Lohse, Marc ;
Usadel, Bjoern .
BIOINFORMATICS, 2014, 30 (15) :2114-2120
[3]   High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries [J].
Jain, Chirag ;
Rodriguez-R, Luis M. ;
Phillippy, Adam M. ;
Konstantinidis, Konstantinos T. ;
Aluru, Srinivas .
NATURE COMMUNICATIONS, 2018, 9
[4]  
Tatusova T., 2013, The NCBI Handbook
[5]   Pathogenesis of infections due to coagulase-negative staphylococci [J].
von Eiff, C ;
Peters, G ;
Heilmann, C .
LANCET INFECTIOUS DISEASES, 2002, 2 (11) :677-685