The Genome of the Beluga Whale (Delphinapterus leucas)

被引：28

作者：

Jones, Steven J. M. ^{[1
,2
,3
]}

Taylor, Gregory A. ^{[1
]}

Chan, Simon ^{[1
]}

Warren, Rene L. ^{[1
]}

Hammond, S. Austin ^{[1
]}

Bilobram, Steven ^{[1
]}

Mordecai, Gideon ^{[4
,5
]}

Suttle, Curtis A. ^{[4
,5
,6
,7
]}

Miller, Kristina M. ^{[8
]}

Schulze, Angela ^{[8
]}

Chan, Amy M. ^{[4
,5
]}

Jones, Samantha J. ^{[1
,3
]}

Tse, Kane ^{[1
]}

Li, Irene ^{[1
]}

Cheung, Dorothy ^{[1
]}

Mungall, Karen L. ^{[1
]}

Choo, Caleb ^{[1
]}

Ally, Adrian ^{[1
]}

Dhalla, Noreen ^{[1
]}

Tam, Angela K. Y. ^{[1
]}

Troussard, Armelle ^{[1
]}

Kirk, Heather ^{[1
]}

Pandoh, Pawan ^{[1
]}

Paulino, Daniel ^{[1
]}

Coope, Robin J. N. ^{[1
]}

Mungall, Andrew J. ^{[1
]}

Moore, Richard ^{[1
]}

Zhao, Yongjun ^{[1
]}

Birol, Inanc ^{[1
,3
]}

Ma, Yussanne ^{[1
]}

Marra, Marco ^{[1
,3
]}

Haulena, Martin ^{[9
]}

机构：

[1] British Columbia Canc Agcy, Canadas Michael Smith Genome Sci Ctr, Vancouver, BC V5Z 4E6, Canada

[2] Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada

[3] Univ British Columbia, Dept Med Genet, Vancouver, BC V6T 1Z3, Canada

[4] Univ British Columbia, Dept Earth Ocean Atmospher Sci, Vancouver, BC V6T 1Z4, Canada

[5] Univ British Columbia, Inst Oceans & Fisheries, Vancouver, BC V6T 1Z4, Canada

[6] Univ British Columbia, Dept Microbiol & Immunol, Vancouver, BC V6T 1Z3, Canada

[7] Univ British Columbia, Dept Bot, Vancouver, BC V6T 1Z4, Canada

[8] Fisheries & Oceans Canada, Mol Genet Sect, Pacific Biol Stn, Nanaimo, BC V9R 5K6, Canada

[9] Vancouver Aquarium, Vancouver, BC V6G 3E2, Canada

来源：

GENES | 2017年 / 8卷 / 12期

关键词：

genome; genome assembly; beluga whale; Delphinapterus leucas; Cetacea; ANNOTATION;

D O I：

10.3390/genes8120378

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The beluga whale is a cetacean that inhabits arctic and subarctic regions, and is the only living member of the genus Delphinapterus. The genome of the beluga whale was determined using DNA sequencing approaches that employed both microfluidic partitioning library and non-partitioned library construction. The former allowed for the construction of a highly contiguous assembly with a scaffold N50 length of over 19 Mbp and total reconstruction of 2.32 Gbp. To aid our understanding of the functional elements, transcriptome data was also derived from brain, duodenum, heart, lung, spleen, and liver tissue. Assembled sequence and all of the underlying sequence data are available at the National Center for Biotechnology Information (NCBI) under the Bioproject accession number PRJNA360851A.

引用

页数：7

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