Calorimetric measurement of the CH/π interaction involved in the molecular recognition of saccharides by aromatic compounds

被引:37
作者
Bautista-Ibanez, Lorena [1 ]
Ramirez-Gualito, Karla [1 ]
Quiroz-Garcia, Beatriz [1 ]
Rojas-Aguilar, Aaron [2 ]
Cuevas, Gabriel [1 ]
机构
[1] Univ Nacl Autonoma Mexico, Inst Quim, Mexico City 04510, DF, Mexico
[2] Inst Politecn Nacl, Ctr Invest & Estudios Avanzados, Dept Quim, Mexico City 07000, DF, Mexico
关键词
D O I
10.1021/jo701926r
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
[GRAPHICS] Can a benzene molecule differentiate between two isomeric carbohydrates? It is generally accepted that two factors govern molecular recognition: complementarity and preorganization. Preorganization requires the presence of cavities for positioning the host's groups of complementary nature to those of the guest. This study shows that, in fact, groups should be complementary to recognize each other (for the case presented here, it is controlled by the CH/pi interaction) but preorganization is not essential. Since weak interactions have their origin in dispersion forces, they also have impact on the enthalpic term of the free energy, so it was considered that their participation can be demonstrated by measuring the energy involved. For recognition to happen, two conditions must be satisfied: specificity and associated stabilizing energy. In this studs we evaluated the heat of dissolution of different carbohydrates such as methyl 2,3,4,6-tetra-O-methyl-alpha-D-mannopyranoside and methyl 2,3,4,6-tetra-0-methyl-beta-D-galactopyranoside using different aromatic solvents. The solvation enthalpies in benzene were -78.8 +/- 3.9 and -88.7 +/- 5.5 kJ mol(-1) for each carbohydrate, respectively; and these values yielded a CH/pi energy of interaction of 9.9 kJ mol(-1). In addition, NMR studies of the effect of the addition of benzene to chloroform solutions of the two carbohydrates showed that benzene specifically interacts with the hydrogen atoms of the pyranose ring at positions 3, 4, and 5 located on the alpha face of the methyl-beta-galactoside, so it is, in fact, able to recognize it. Thus, the interactions between carbohydrates and the aromatic residues of proteins occur in the absence of the confinement generated by the protein structure. By experimentally measuring the energy associated with this interaction and comparing it to theoretical calculations, it was also possible to unequivocally determine the existence of CH/pi interactions between carbohydrates and proteins.
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页码:849 / 857
页数:9
相关论文
共 59 条
[1]  
Anslyn E. V., 2006, MODERN PHYS ORGANIC, P207
[2]   Preparation, isolation, and characterization of permethylated galactosides and fucosides [J].
Asres, DD ;
Perreault, H .
CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1999, 77 (03) :319-325
[3]   Intramolecular carbohydrate-aromatic interactions and intermolecular van der Waals interactions enhance the molecular recognition ability of GMI glycomimetics for cholera toxin [J].
Bernardi, A ;
Arosio, D ;
Potenza, D ;
Sánchez-Medina, I ;
Mari, S ;
Cañada, FJ ;
Jiménez-Barbero, J .
CHEMISTRY-A EUROPEAN JOURNAL, 2004, 10 (18) :4395-4406
[4]  
Berry RS., 1980, Physical Chemistry
[5]   A tricatecholic receptor for carbohydrate recognition: Synthesis and binding studies [J].
Cacciarini, Martina ;
Cordiano, Elisa ;
Nativi, Cristina ;
Roelens, Stefano .
JOURNAL OF ORGANIC CHEMISTRY, 2007, 72 (10) :3933-3936
[6]   A high-affinity carbohydrate-containing inhibitor of matrix metalloproteinases [J].
Calderone, Vito ;
Fragai, Marco ;
Luchinat, Claudio ;
Nativi, Cristina ;
Richichi, Barbara ;
Roelens, Stefano .
CHEMMEDCHEM, 2006, 1 (06) :598-+
[7]   On the importance of carbohydrate-aromatic interactions for the molecular recognition of oligosaccharides by proteins:: NMR studies of the structure and binding affinity of AcAMP2-like peptides with non-natural naphthyl and fluoroaromatic residues [J].
Chávez, MI ;
Andreu, C ;
Vidal, P ;
Aboitiz, N ;
Freire, F ;
Groves, P ;
Asensio, JL ;
Asensio, G ;
Muraki, M ;
Cañada, FJ ;
Jiménez-Barbero, J .
CHEMISTRY-A EUROPEAN JOURNAL, 2005, 11 (23) :7060-7074
[8]  
Cox J.D., 1970, THERMOCHEMISTRY ORGA
[9]  
Davis AP, 1999, ANGEW CHEM INT EDIT, V38, P2978
[10]  
Davis AP, 1998, ANGEW CHEM INT EDIT, V37, P2270, DOI 10.1002/(SICI)1521-3773(19980904)37:16<2270::AID-ANIE2270>3.0.CO