Interaction of Cytidine 5′-Monophosphate with Au(111): An In Situ Infrared Spectroscopic Study

被引:12
作者
Doneux, Thomas [1 ,2 ]
Fojt, Lukas [1 ,2 ]
机构
[1] ASCR, Inst Biophys, VVI, Brno 61265, Czech Republic
[2] Univ Libre Bruxelles, Fac Sci, B-1050 Brussels, Belgium
关键词
chemisorption; electrochemistry; interfaces; IR spectroscopy; nucleobases; NUCLEIC-ACID BASES; SCANNING-TUNNELING-MICROSCOPY; SINGLE-CRYSTAL ELECTRODES; DENSITY-FUNCTIONAL THEORY; MECHANICAL FORCE-FIELDS; DNA BASES; PHASE-TRANSITIONS; BINDING-PROPERTIES; RIBONUCLEIC-ACID; METAL-COMPLEXES;
D O I
10.1002/cphc.200900018
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The interaction of cytidine 5-monophosphate (CMP) with gold surfaces is studied by means of in situ infrared spectroscopy and cyclic voltammetry at the Au(111) acqueous solution interface similar to other nucleic acid components cytidine monophosphate is chemisorbed on the surface at positive potentials and the amount of adsorbed CMP increases with the potential. subtractively (SNIETIRS) is used to identify the adsorbed and desorbed species. Upon electrochemical desorption, the molecules released in solution are unprotonated on the N3 atom striking similarities are found between the spectrum of adsorbed CMP and the solution spectrum of protonated CMP. The origin of such similarities is discussed. The results strongly suggest that chemisorption occurs through the N3 atom of the pyrimidine ring. A comparison is drawn with cytidine whose electrochemical and spectroscopic behaviors are also investigated.
引用
收藏
页码:1649 / 1655
页数:7
相关论文
共 68 条
[1]   Neutron inelastic scattering, optical spectroscopies and scaled quantum mechanical force fields for analyzing the vibrational dynamics of pyrimidine nucleic acid bases: 3. Cytosine [J].
Aamouche, A ;
Ghomi, M ;
Grajcar, L ;
Baron, MH ;
Romain, F ;
Baumruk, V ;
Stepanek, J ;
Coulombeau, C ;
Jobic, H ;
Berthier, G .
JOURNAL OF PHYSICAL CHEMISTRY A, 1997, 101 (51) :10063-10074
[2]   In situ infrared study of cytosine adsorption on gold electrodes [J].
Ataka, K ;
Osawa, M .
JOURNAL OF ELECTROANALYTICAL CHEMISTRY, 1999, 460 (1-2) :188-196
[3]   FREEZE-DRYING FOURIER-TRANSFORM INFRARED ATTENUATED TOTAL REFLECTION SPECTROSCOPY OF SURFACE ABSORBED LAYERS - WATER-ASSISTED PROTON-TRANSFER IN CYTIDINE-5'-PHOSPHORIC ACID [J].
BADILESCU, S ;
SANDORFY, C .
CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1986, 64 (12) :2404-2408
[4]   Effect of the crystallographic orientation of gold single-crystal electrodes on the occurrence of 2D phase transitions in adsorbed organic monolayers [J].
Bare, S ;
Van Krieken, M ;
Buess-Herman, C ;
Hamelin, A .
JOURNAL OF ELECTROANALYTICAL CHEMISTRY, 1998, 445 (1-2) :7-11
[5]  
Bhattacharya P.K., 2005, METAL IONS BIOCH, DOI [10.1201/9781003108429, DOI 10.1201/9781003108429]
[6]   2-DIMENSIONAL ASSEMBLY OF PURINES AND PYRIMIDINES ON AU(111) [J].
BOLAND, T ;
RATNER, BD .
LANGMUIR, 1994, 10 (10) :3845-3852
[7]  
Buess-Herman C, 1999, INTERFACIAL ELECTROCHEMISTRY, P427
[8]   SELF-ASSEMBLED MONOLAYERS AT ELECTRODE METAL-SURFACES [J].
BUESSHERMAN, C .
PROGRESS IN SURFACE SCIENCE, 1994, 46 (04) :335-375
[9]  
Cho KH, 2008, B KOREAN CHEM SOC, V29, P69
[10]   Influence of alkali cations on the infrared spectra of adsorbed (bi)sulphate on Pt(111) electrodes [J].
Climent, Victor ;
Garcia-Araez, Nuria ;
Feliu, Juan M. .
ELECTROCHEMISTRY COMMUNICATIONS, 2006, 8 (10) :1577-1582