Peroxide Activation for Electrophilic Reactivity by the Binuclear Non-heme Iron Enzyme AurF

被引:48
作者
Park, Kiyoung [1 ,3 ]
Li, Ning [4 ]
Kwak, Yeonju [1 ]
Srnec, Martin [1 ]
Bell, Caleb B. [1 ]
Liu, Lei V. [1 ]
Wong, Shaun D. [1 ]
Yoda, Yoshitaka [6 ]
Kitao, Shinji [7 ]
Seto, Makoto [7 ]
Hu, Michael [8 ]
Zhao, Jiyong [8 ]
Krebs, Carsten [4 ,5 ]
Bollinger, J. Martin, Jr. [4 ,5 ]
Solomon, Edward I. [1 ,2 ]
机构
[1] Stanford Univ, Dept Chem, Stanford, CA 94305 USA
[2] SLAC Natl Accelerator Lab, Stanford Synchrotron Radiat Lightsource, Stanford, CA 94309 USA
[3] Korea Adv Inst Sci & Technol, Dept Chem, Daejeon 34141, South Korea
[4] Penn State Univ, Dept Biochem & Mol Biol, University Pk, PA 16802 USA
[5] Penn State Univ, Dept Chem, University Pk, PA 16802 USA
[6] SPring 8 JASRI, Sayo, Hyogo 6795198, Japan
[7] Kyoto Univ, Res Reactor Inst, Kumatori, Osaka 5900494, Japan
[8] Argonne Natl Lab, Adv Photon Source, Lemont, IL 60439 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
MOLECULAR-ORBITAL METHODS; NUCLEAR RESONANT SCATTERING; CHLORAMPHENICOL BIOSYNTHETIC-PATHWAY; METHANE MONOOXYGENASE HYDROXYLASE; HUMAN DEOXYHYPUSINE HYDROXYLASE; COLI RIBONUCLEOTIDE REDUCTASE; MAGNETIC CIRCULAR-DICHROISM; DENSITY-FUNCTIONAL THEORY; GAUSSIAN-BASIS SETS; ELECTRONIC-STRUCTURE;
D O I
10.1021/jacs.7b02997
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Binuclear non-heme iron enzymes activate O-2 for diverse chemistries that include oxygenation of organic substrates and hydrogen atom abstraction. This process often involves the formation of peroxo-bridged biferric intermediates, only some of which can perform electrophilic reactions. To elucidate the geometric and electronic structural requirements to activate peroxo reactivity, the active peroxo intermediate in 4-aminobenzoate N-oxygenase (AurF) has been characterized spectroscopically and computationally. A magnetic circular dichroism study of reduced AurF shows that its electronic and geometric structures are poised to react rapidly with O-2. Nuclear resonance vibrational spectroscopic definition of the peroxo intermediate formed in this reaction shows that the active intermediate has a protonated peroxo bridge. Density functional theory computations on the structure established here show that the protonation activates peroxide for electrophilic/single-electron-transfer reactivity. This activation of peroxide by protonation is likely also relevant to the reactive peroxo intermediates in other binuclear non-heme iron enzymes.
引用
收藏
页码:7062 / 7070
页数:9
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