Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-κB regulation

被引:176
作者
Tokunaga, Fuminori [1 ,2 ]
Nishimasu, Hiroshi [3 ]
Ishitani, Ryuichiro [3 ]
Goto, Eiji [1 ]
Noguchi, Takuya [1 ]
Mio, Kazuhiro [4 ]
Kamei, Kiyoko [1 ,2 ]
Ma, Averil [5 ]
Iwai, Kazuhiro [2 ,6 ]
Nureki, Osamu [3 ]
机构
[1] Gunma Univ, Inst Mol & Cellular Regulat, Mol Cell Biol Lab, Maebashi, Gunma 3718512, Japan
[2] Osaka Univ, Grad Sch Med, Dept Biophys & Biochem, Suita, Osaka, Japan
[3] Univ Tokyo, Grad Sch Sci, Dept Biophys & Biochem, Bunkyo Ku, Tokyo, Japan
[4] Natl Inst Adv Ind Sci & Technol, Biomed Informat Res Ctr, Koto Ku, Tokyo, Japan
[5] Univ Calif San Francisco, Dept Med, San Francisco, CA USA
[6] Osaka Univ, Grad Sch Frontier Biosci, Cell Biol & Metab Grp, Suita, Osaka, Japan
基金
日本学术振兴会; 日本科学技术振兴机构;
关键词
A20; deubiquitinase; lymphoma; NF-kappa B; ubiquitin; UBIQUITIN LIGASE; STRUCTURAL BASIS; BINDING; ACTIVATION; CHAINS; PROTEIN; NEMO; INFLAMMATION; INHIBITION; APOPTOSIS;
D O I
10.1038/emboj.2012.241
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
LUBAC (linear ubiquitin chain assembly complex) activates the canonical NF-kappa B pathway through linear polyubiquitination of NEMO (NF-kappa B essential modulator, also known as IKK gamma) and RIP1. However, the regulatory mechanism of LUBAC-mediated NF-kappa B activation remains elusive. Here, we show that A20 suppresses LUBAC-mediated NF-kappa B activation by binding linear polyubiquitin via the C-terminal seventh zinc finger (ZF7), whereas CYLD suppresses it through deubiquitinase (DUB) activity. We determined the crystal structures of A20 ZF7 in complex with linear diubiquitin at 1.70-1.98 angstrom resolutions. The crystal structures revealed that A20 ZF7 simultaneously recognizes the Met1-linked proximal and distal ubiquitins, and that genetic mutations associated with B cell lymphomas map to the ubiquitin-binding sites. Our functional analysis indicated that the binding of A20 ZF7 to linear polyubiquitin contributes to the recruitment of A20 into a TNF receptor (TNFR) signalling complex containing LUBAC and I kappa B kinase (IKK), which results in NF-kappa B suppression. These findings provide new insight into the regulation of immune and inflammatory responses. The EMBO Journal (2012) 31, 3856-3870. doi:10.1038/emboj.2012.241; Published online 28 August 2012
引用
收藏
页码:3856 / 3870
页数:15
相关论文
共 63 条
[1]   PHENIX:: building new software for automated crystallographic structure determination [J].
Adams, PD ;
Grosse-Kunstleve, RW ;
Hung, LW ;
Ioerger, TR ;
McCoy, AJ ;
Moriarty, NW ;
Read, RJ ;
Sacchettini, JC ;
Sauter, NK ;
Terwilliger, TC .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 :1948-1954
[2]   Inflammation meets cancer, with NF-κB as the matchmaker [J].
Ben-Neriah, Yinon ;
Karin, Michael .
NATURE IMMUNOLOGY, 2011, 12 (08) :715-723
[3]   Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-κB Signaling [J].
Bosanac, Ivan ;
Wertz, Ingrid E. ;
Pan, Borlan ;
Yu, Christine ;
Kusam, Saritha ;
Lam, Cynthia ;
Phu, Lilian ;
Phung, Qui ;
Maurer, Brigitte ;
Arnott, David ;
Kirkpatrick, Donald S. ;
Dixit, Vishva M. ;
Hymowitz, Sarah G. .
MOLECULAR CELL, 2010, 40 (04) :548-557
[4]   Lys11-linked ubiquitin chains adopt compact conformations and are preferentially hydrolyzed by the deubiquitinase Cezanne [J].
Bremm, Anja ;
Freund, Stefan M. V. ;
Komander, David .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2010, 17 (08) :939-U47
[5]   Loss of the cylindromatosis tumour suppressor inhibits apoptosis by activating NF-κB [J].
Brummelkamp, TR ;
Nijman, SMB ;
Dirac, AMG ;
Bernards, R .
NATURE, 2003, 424 (6950) :797-801
[6]   Finding NEMO by K63-linked polyubiquitin chain [J].
Chen, F. ;
Bhatia, D. ;
Chang, Q. ;
Castranova, V. .
CELL DEATH AND DIFFERENTIATION, 2006, 13 (11) :1835-1838
[7]   Ubiquitination in signaling to and activation of IKK [J].
Chen, Zhijian J. .
IMMUNOLOGICAL REVIEWS, 2012, 246 :95-106
[8]   Mutations of multiple genes cause deregulation of NF-κB in diffuse large B-cell lymphoma [J].
Compagno, Mara ;
Lim, Wei Keat ;
Grunn, Adina ;
Nandula, Subhadra V. ;
Brahmachary, Manisha ;
Shen, Qiong ;
Bertoni, Francesco ;
Ponzoni, Maurilio ;
Scandurra, Marta ;
Califano, Andrea ;
Bhagat, Govind ;
Chadburn, Amy ;
Dalla-Favera, Riccardo ;
Pasqualucci, Laura .
NATURE, 2009, 459 (7247) :717-U124
[9]   The Ubiquitin Ligase XIAP Recruits LUBAC for NOD2 Signaling in Inflammation and Innate Immunity [J].
Damgaard, Rune Busk ;
Nachbur, Ueli ;
Yabal, Monica ;
Wong, Wendy Wei-Lynn ;
Fiil, Berthe Katrine ;
Kastirr, Mischa ;
Rieser, Eva ;
Rickard, James Arthur ;
Bankovacki, Aleksandra ;
Peschel, Christian ;
Ruland, Juergen ;
Bekker-Jensen, Simon ;
Mailand, Niels ;
Kaufmann, Thomas ;
Strasser, Andreas ;
Walczak, Henning ;
Silke, John ;
Jost, Philipp J. ;
Gyrd-Hansen, Mads .
MOLECULAR CELL, 2012, 46 (06) :746-758
[10]   The zinc finger protein A20 interacts with a novel anti-apoptotic protein which is cleaved by specific caspases [J].
De Valck, D ;
Jin, DY ;
Heyninck, K ;
Van de Craen, M ;
Contreras, R ;
Fiers, W ;
Jeang, KT ;
Beyaert, R .
ONCOGENE, 1999, 18 (29) :4182-4190