Draft Genome Sequence of Bacteroides faecis MAJ27T, a Strain Isolated from Human Feces

被引：1

作者：

Kim, Min-Soo

Whon, Tae Woong

Roh, Seong Woon

Shin, Na-Ri

Bae, Jin-Woo ^{[1
]}

机构：

[1] Kyung Hee Univ, Dept Biol, Seoul 130701, South Korea

来源：

JOURNAL OF BACTERIOLOGY | 2011年 / 193卷 / 23期

基金：

新加坡国家研究基金会;

关键词：

HUMAN INTESTINE; THETAIOTAOMICRON; IDENTIFICATION; ANNOTATION; EVOLUTION; SYMBIONT; TOOL;

D O I：

10.1128/JB.06210-11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Despite the ecological importance of the dominant gut bacteria Bacteroides, few genomes have been defined. The Gram-negative, strictly anaerobic intestinal bacterium Bacteroides faecis MAJ27(T) was isolated from the feces of a healthy adult. Here, the draft genome sequence of the type strain B. faecis MAJ27 (6.11 Mbp) is reported.

引用

收藏

页码：6801 / 6802

页数：2

相关论文

共 20 条

[1] Functional genomic and metabolic studies of the adaptations of a prominent adult human gut symbiont, Bacteroides thetaiotaomicron, to the suckling period [J].

Bjursell, Magnus K. ;

Martens, Eric C. ;

Gordon, Jeffrey I. .

JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (47) :36269-36279

[2] EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences [J].

Chun, Jongsik ;

Lee, Jae-Hak ;

Jung, Yoonyoung ;

Kim, Myungjin ;

Kim, Seil ;

Kim, Byung Kwon ;

Lim, Young-Woon .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2259-2261

[3] Draft Genome Sequence of Bacteroides vulgatus PC510, a Strain Isolated from Human Feces [J].

Cuiv, Paraic O. ;

Klaassens, Eline S. ;

Durkin, A. Scott ;

Harkins, Derek M. ;

Foster, Les ;

McCorrison, Jamison ;

Torralba, Manolito ;

Nelson, Karen E. ;

Morrison, Mark .

JOURNAL OF BACTERIOLOGY, 2011, 193 (15) :4025-4026

[4] Improved microbial gene identification with GLIMMER [J].

Delcher, AL ;

Harmon, D ;

Kasif, S ;

White, O ;

Salzberg, SL .

NUCLEIC ACIDS RESEARCH, 1999, 27 (23) :4636-4641

[5] How host-microbial interactions shape the nutrient environment of the mammalian intestine [J].

Hooper, LV ;

Midtvedt, T ;

Gordon, JI .

ANNUAL REVIEW OF NUTRITION, 2002, 22 :283-307

[6] Bacteroides faecis sp. nov., isolated from human faeces [J].

Kim, Min-Soo ;

Roh, Seong Woon ;

Bae, Jin-Woo .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 :2572-2576

[7] Ecological and evolutionary forces shaping microbial diversity in the human intestine [J].

Ley, RE ;

Peterson, DA ;

Gordon, JI .

CELL, 2006, 124 (04) :837-848

[8] tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence [J].

Lowe, TM ;

Eddy, SR .

NUCLEIC ACIDS RESEARCH, 1997, 25 (05) :955-964

[9] The convergence of carbohydrate active gene repertoires in human gut microbes [J].

Lozupone, Catherine A. ;

Hamady, Micah ;

Cantarel, Brandi L. ;

Coutinho, Pedro M. ;

Henrissat, Bernard ;

Gordon, Jeffrey I. ;

Knight, Rob .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (39) :15076-15081

[10]

Manson J. M., 2007, GASTROINTESTINAL MIC, P15