The Importance of Short- and Long-Range Exchange on Various Excited State Properties of DNA Monomers, Stacked Complexes, and Watson-Crick Pairs

被引:73
作者
Raeber, Alexandra E.
Wong, Bryan M. [1 ]
机构
[1] Univ Calif Riverside, Dept Chem & Environm Engn, Riverside, CA 92521 USA
关键词
CHARGE-TRANSFER; BUILDING-BLOCKS; BASE-PAIRS; OPTICAL-PROPERTIES; ELECTRON-TRANSFER; DENSITY; DFT; BENCHMARK; DIMER; FLUORESCENCE;
D O I
10.1021/acs.jctc.5b00105
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present a detailed analysis of several time-dependent DFT (TD-DFT) methods, including conventional hybrid functionals and two types of nonempirically tuned range-separated functionals, for predicting a diverse set of electronic excitations in DNA nucleobase monomers and dimers. This large and extensive set of excitations comprises a total of 50 different transitions (for each tested DFT functional) that includes several n -> pi and pi -> pi* valence excitations, long-range charge-transfer excitations, and extended Rydberg transitions (complete with benchmark calculations from high-level EOM-CCSD(T) methods). The presence of localized valence excitations as well as extreme long-range charge-transfer excitations in these systems poses a serious challenge for TD-DFT methods that allows us to assess the importance of both short- and long-range exchange contributions for simultaneously predicting all of these various transitions. In particular, we find that functionals that do not have both short- and full long-range exchange components are unable to predict the different types of nucleobase excitations with the same accuracy. Most importantly, the current study highlights the importance of both short-range exchange and a nonempirically tuned contribution of long-range exchange for accurately predicting the diverse excitations in these challenging nucleobase systems.
引用
收藏
页码:2199 / 2209
页数:11
相关论文
共 55 条
[41]   Benchmark Studies on the Building Blocks of DNA. 3. Watson-Crick and Stacked Base Pairs [J].
Szalay, Peter G. ;
Watson, Thomas ;
Perera, Ajith ;
Lotrich, Victor ;
Bartlett, Rodney J. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2013, 117 (15) :3149-3157
[42]   Benchmark Studies on the Building Blocks of DNA. 2. Effect of Biological Environment on the Electronic Excitation Spectrum of Nucleobases [J].
Szalay, Peter G. ;
Watson, Thomas ;
Perera, Ajith ;
Lotrich, Victor ;
Fogarasi, Geza ;
Bartlett, Rodney J. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2012, 116 (35) :8851-8860
[43]   Benchmark Studies on the Building Blocks of DNA. 1. Superiority of Coupled Cluster Methods in Describing the Excited States of Nucleobases in the Franck-Condon Region [J].
Szalay, Peter G. ;
Watson, Thomas ;
Perera, Ajith ;
Lotrich, Victor F. ;
Bartlett, Rodney J. .
JOURNAL OF PHYSICAL CHEMISTRY A, 2012, 116 (25) :6702-6710
[44]   A long-range-corrected time-dependent density functional theory [J].
Tawada, Y ;
Tsuneda, T ;
Yanagisawa, S ;
Yanai, T ;
Hirao, K .
JOURNAL OF CHEMICAL PHYSICS, 2004, 120 (18) :8425-8433
[45]   Long-range-short-range separation of the electron-electron interaction in density-functional theory [J].
Toulouse, J ;
Colonna, F ;
Savin, A .
PHYSICAL REVIEW A, 2004, 70 (06) :062505-1
[46]   A TDDFT study of the optical response of DNA bases, base pairs, and their tautomers in the gas phase [J].
Tsolakidis, A ;
Kaxiras, E .
JOURNAL OF PHYSICAL CHEMISTRY A, 2005, 109 (10) :2373-2380
[47]   A TDDFT study of the excited states of DNA bases and their assemblies [J].
Varsano, D ;
Di Felice, R ;
Marques, MAL ;
Rubio, A .
JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (14) :7129-7138
[48]   Femtosecond direct observation of charge transfer between bases in DNA [J].
Wan, CZ ;
Fiebig, T ;
Schiemann, O ;
Barton, JK ;
Zewail, AH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (26) :14052-14055
[49]   Optoelectronic and Excitonic Properties of Oligoacenes: Substantial Improvements from Range-Separated Time-Dependent Density Functional Theory [J].
Wong, Bryan M. ;
Hsieh, Timothy H. .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2010, 6 (12) :3704-3712
[50]   Coumarin dyes for dye-sensitized solar cells: A long-range-corrected density functional study [J].
Wong, Bryan M. ;
Cordaro, Joseph G. .
JOURNAL OF CHEMICAL PHYSICS, 2008, 129 (21)