Theory of lethal mutagenesis for viruses

被引:192
作者
Bull, J. J.
Sanjuan, R.
Wilke, C. O. [1 ]
机构
[1] Univ Texas, Sect Integrat Biol, Austin, TX 78712 USA
[2] Univ Texas, Inst Cellular & Mol Biol, Austin, TX 78712 USA
[3] Univ Texas, Ctr Computat Biol & Bioinformat, Austin, TX 78712 USA
关键词
D O I
10.1128/JVI.01624-06
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Mutation is the basis of adaptation. Yet, most mutations are detrimental, and elevating mutation rates will impair a population's fitness in the short term. The latter realization has led to the concept of lethal mutagenesis for curing viral infections, and work with drugs such as ribavirin has supported this perspective. As yet, there is no formal theory of lethal mutagenesis, although reference is commonly made to Eigen's error catastrophe theory. Here, we propose a theory of lethal mutagenesis. With an obvious parallel to the epidemiological threshold for eradication of a disease, a sufficient condition for lethal mutagenesis is that each viral genotype produces, on average, less than one progeny virus that goes on to infect a new cell. The extinction threshold involves an evolutionary component based on the mutation rate, but it also includes an ecological component, so the threshold cannot be calculated from the mutation rate alone. The genetic evolution of a large population undergoing mutagenesis is independent of whether the population is declining or stable, so there is no runaway accumulation of mutations or genetic signature for lethal mutagenesis that distinguishes it from a level of mutagenesis under which the population is maintained. To detect lethal mutagenesis, accurate measurements of the genome-wide mutation rate and the number of progeny per infected cell that go on to infect new cells are needed. We discuss three methods for estimating the former. Estimating the latter is more challenging, but broad limits to this estimate may be feasible.
引用
收藏
页码:2930 / 2939
页数:10
相关论文
共 65 条
  • [1] Viral error catastrophe by mutagenic nucleosides
    Anderson, JP
    Daifuku, R
    Loeb, LA
    [J]. ANNUAL REVIEW OF MICROBIOLOGY, 2004, 58 : 183 - 205
  • [2] ANDERSON R M, 1991
  • [3] THE VIABILITY OF NEAR-NORMAL IRRADIATED CHROMOSOMES
    BATEMAN, AJ
    [J]. INTERNATIONAL JOURNAL OF RADIATION BIOLOGY AND RELATED STUDIES IN PHYSICS CHEMISTRY AND MEDICINE, 1959, 1 (02): : 170 - 180
  • [4] Bell G., 1982, MASTERPIECE NATURE E
  • [5] Quasispecies made simple
    Bull, JJ
    Meyers, LA
    Lachmann, M
    [J]. PLOS COMPUTATIONAL BIOLOGY, 2005, 1 (06) : 450 - 460
  • [6] Epistasis and its relationship to canalization in the RNA virus φ6
    Burch, CL
    Chao, L
    [J]. GENETICS, 2004, 167 (02) : 559 - 567
  • [7] Burger R., 2000, The Mathematical Theory of Selection, Recombination, and Mutation
  • [8] BUTCHER D, 1995, GENETICS, V141, P431
  • [9] CAHO L, 2002, J VIROL, V76, P3276
  • [10] FITNESS OF RNA VIRUS DECREASED BY MULLER RATCHET
    CHAO, L
    [J]. NATURE, 1990, 348 (6300) : 454 - 455