Beyond small molecules: targeting G-quadruplex structures with oligonucleotides and their analogues

被引:54
|
作者
Cadoni, Enrico [1 ]
De Paepe, Lessandro [1 ]
Manicardi, Alex [1 ]
Madder, Annemieke [1 ]
机构
[1] Univ Ghent, Organ & Biomimet Chem Res Grp, Krijgslaan 281 S4, B-9000 Ghent, Belgium
关键词
PEPTIDE NUCLEIC-ACID; RNA G-QUADRUPLEX; LONG TERMINAL REPEAT; HYBRID G-QUADRUPLEX; G-RICH SEQUENCE; DNA QUADRUPLEXES; TELOMERIC REPEAT; PROMOTER REGION; KRAS PROMOTER; CANCER CELLS;
D O I
10.1093/nar/gkab334
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
G-Quadruplexes (G4s) are widely studied secondary DNA/RNA structures, naturally occurring when G-rich sequences are present. The strategic localization of G4s in genome areas of crucial importance, such as proto-oncogenes and telomeres, entails fundamental implications in terms of gene expression regulation and other important biological processes. Although thousands of small molecules capable to induce G4 stabilization have been reported over the past 20 years, approaches based on the hybridization of a synthetic probe, allowing sequence-specific G4-recognition and targeting are still rather limited. In this review, after introducing important general notions about G4s, we aim to list, explain and critically analyse in more detail the principal approaches available to target G4s by using oligonucleotides and synthetic analogues such as Locked Nucleic Acids (LNAs) and Peptide Nucleic Acids (PNAs), reporting on the most relevant examples described in literature to date.
引用
收藏
页码:6638 / 6659
页数:22
相关论文
共 50 条
  • [1] Targeting DNA G-Quadruplex Structures with Peptide Nucleic Acids
    Panyutin, Igor G.
    Onyshchenko, Mykola I.
    Englund, Ethan A.
    Appella, Daniel H.
    Neumann, Ronald D.
    CURRENT PHARMACEUTICAL DESIGN, 2012, 18 (14) : 1984 - 1991
  • [2] Recent advances in targeting the telomeric G-quadruplex DNA sequence with small molecules as a strategy for anticancer therapies
    Islam, Mohammad K.
    Jackson, Paul J. M.
    Rahman, Khondaker M.
    Thurston, David E.
    FUTURE MEDICINAL CHEMISTRY, 2016, 8 (11) : 1259 - 1290
  • [3] Relevance of G-quadruplex structures to pharmacogenetics
    Cree, Simone L.
    Kennedy, Martin A.
    FRONTIERS IN PHARMACOLOGY, 2014, 5
  • [4] Overview of the RNA G-quadruplex structures
    Malgowska, Magdalena
    Czajczynska, Karolina
    Gudanis, Dorota
    Tworak, Aleksander
    Gdaniec, Zofia
    ACTA BIOCHIMICA POLONICA, 2016, 63 (04) : 609 - 621
  • [5] Improvement of porphyrins for G-quadruplex DNA targeting
    Romera, Carmen
    Bombarde, Oriane
    Bonnet, Romaric
    Gomez, Dennis
    Dumy, Pascal
    Calsou, Patrick
    Gwan, Jean-Fang
    Lin, Jung-Hsin
    Defrancq, Eric
    Pratviel, Genevieve
    BIOCHIMIE, 2011, 93 (08) : 1310 - 1317
  • [6] G-quadruplex interacting small molecules and drugs: from bench toward bedside
    Mueller, Sebastian
    Rodriguez, Raphael
    EXPERT REVIEW OF CLINICAL PHARMACOLOGY, 2014, 7 (05) : 663 - 679
  • [7] G-Quadruplex: A Regulator of Gene Expression and Its Chemical Targeting
    Tian, Tian
    Chen, Yu-Qi
    Wang, Shao-Ru
    Zhou, Xiang
    CHEM, 2018, 4 (06): : 1314 - 1344
  • [8] G-quadruplex structures: in vivo evidence and function
    Lipps, Hans J.
    Rhodes, Daniela
    TRENDS IN CELL BIOLOGY, 2009, 19 (08) : 414 - 422
  • [9] G-Quadruplex Targeting in the Fight against Viruses: An Update
    Ruggiero, Emanuela
    Zanin, Irene
    Terreri, Marianna
    Richter, Sara N.
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (20)
  • [10] RETRACTED: Human telomeric G-quadruplex: targeting with small molecules (Retraction of vol 6, pg 627, 2008) (Retracted Article)
    Arora, Amit
    Kumar, Niti
    Agarwal, Tani
    Maiti, Souvik
    FEBS JOURNAL, 2010, 277 (05) : 1345 - +