Ochrobactrum ciceri sp nov., isolated from nodules of Cicer arietinum

被引:44
作者
Imran, A. [1 ]
Hafeez, F. Y. [1 ]
Fruehling, A. [2 ]
Schumann, P. [2 ]
Malik, K. A. [3 ]
Stackebrandt, E. [2 ]
机构
[1] NIBGE, Faisalabad, Pakistan
[2] DSMZ German Collect Microorganisms & Cell Culture, D-38124 Braunschweig, Germany
[3] Forman Christian Coll Univ, Dept Biol Sci, Lahore, Pakistan
关键词
HUMAN CLINICAL SPECIMENS; COMPARATIVE SEQUENCE; RENATURATION RATES; DNA HYBRIDIZATION; WATER RIVULET; BRUCELLA; ANTHROPI; BACTERIA; IDENTIFICATION; ENVIRONMENT;
D O I
10.1099/ijs.0.013987-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative, aerobic, rod-shaped, non-spore-forming bacterial strain, Ca-34(T), was isolated from nodules of chickpea (Cicer arietinum) in Pakistan and studied for its taxonomic affiliation. The almost full-length 16S rRNA gene sequence showed highest similarities to those of strains of the genus Ochrobactrum. Based on results of MALDI-TOF MS and 16S rRNA gene sequence similarity (98.6%), strain Ca-34(T) and Ochrobactrum intermedium LMG 3301(T) are phylogenetic neighbours; the two strains shared DNA DNA relatedness of 64%. The fatty acid profile [predominantly C(18:1)omega 7c (67.7%) and C(19:0) cyclo omega 8c (19.6%)] also supported the genus affiliation. Metabolically, strain Ca-34(T) differed from other type strains of Ochrobactrum in many reactions and from all type strains in testing positive for gelatin hydrolysis and in testing negative for assimilation of alaninamide and L-threonine. Based on phenotypic and genotypic data, we conclude that strain Ca-34(T) represents a novel species, for which we propose the name Ochrobactrum ciceri sp. nov. (type strain Ca-34(T) =DSM 22292(T) =CCUG 57879(T)).
引用
收藏
页码:1548 / 1553
页数:6
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