Instrument-free nucleic acid amplification assays for global health settings

被引:20
作者
LaBarre, Paul [1 ]
Boyle, David [1 ]
Hawkins, Kenneth [1 ]
Weigl, Bernhard [1 ]
机构
[1] PATH, Diagnost Grp, Seattle, WA 98121 USA
来源
SENSING TECHNOLOGIES FOR GLOBAL HEALTH, MILITARY MEDICINE, DISASTER RESPONSE, AND ENVIRONMENTAL MONITORING AND BIOMETRIC TECHNOLOGY FOR HUMAN IDENTIFICATION VIII | 2011年 / 8029卷
关键词
Low-resource settings; point of care diagnostics; non-instrumented diagnostics; infection detection; nucleic acid amplification; molecular diagnostics; sample preparation; laminar flow; MEDIATED ISOTHERMAL AMPLIFICATION; LATERAL FLOW DIPSTICK; HUMAN-IMMUNODEFICIENCY-VIRUS; RAPID DIAGNOSTIC-TESTS; HELICASE-DEPENDENT AMPLIFICATION; TAURA-SYNDROME VIRUS; DRIED BLOOD SPOTS; REVERSE-TRANSCRIPTION; PLASMODIUM-FALCIPARUM; DNA AMPLIFICATION;
D O I
10.1117/12.882868
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Many infectious diseases that affect global health are most accurately diagnosed through nucleic acid amplification and detection. However, existing nucleic acid amplification tests are too expensive and complex for most low-resource settings. The small numbers of centralized laboratories that exist in developing countries tend to be in urban areas and primarily cater to the affluent. In contrast, rural area health care facilities commonly have only basic equipment and health workers have limited training and little ability to maintain equipment and handle reagents. 1 Reliable electric power is a common infrastructure shortfall. In this paper, we discuss a practical approach to the design and development of non-instrumented molecular diagnostic tests that exploit the benefits of isothermal amplification strategies. We identify modular instrument-free technologies for sample collection, sample preparation, amplification, heating, and detection. By appropriately selecting and integrating these instrument-free modules, we envision development of an easy to use, infrastructure independent diagnostic test that will enable increased use of highly accurate molecular diagnostics at the point of care in low-resource settings.
引用
收藏
页数:15
相关论文
共 68 条
[31]   Tolerance of loop-mediated isothermal amplification to a culture medium and biological substances [J].
Kaneko, Hisatoshi ;
Kawana, Takashi ;
Fukushima, Eiko ;
Suzutani, Tatsuo .
JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS, 2007, 70 (03) :499-501
[32]   Shrimp Taura syndrome virus detection by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick [J].
Kiatpathomchai, Wansika ;
Jaroenram, Wansadaj ;
Arunrut, Narong ;
Jitrapakdee, Sarawut ;
Flegel, T. W. .
JOURNAL OF VIROLOGICAL METHODS, 2008, 153 (02) :214-217
[33]   Loop-mediated isothermal amplification for detection of African trypanosomes [J].
Kuboki, N ;
Inoue, N ;
Sakurai, T ;
Di Cello, F ;
Grab, DJ ;
Suzuki, H ;
Sugimoto, C ;
Igarashi, I .
JOURNAL OF CLINICAL MICROBIOLOGY, 2003, 41 (12) :5517-5524
[34]  
LaBarre P., 2010, P 32 ANN INT C I EL
[35]  
LaBarre P, 2009, 41 ANN OAK RIDG C AP
[36]   A Simple, Inexpensive Device for Nucleic Acid Amplification without Electricity-Toward Instrument-Free Molecular Diagnostics in Low-Resource Settings [J].
LaBarre, Paul ;
Hawkins, Kenneth R. ;
Gerlach, Jay ;
Wilmoth, Jared ;
Beddoe, Andrew ;
Singleton, Jered ;
Boyle, David ;
Weigl, Bernhard .
PLOS ONE, 2011, 6 (05)
[37]   ENGINEERING GLOBAL HEALTH [J].
LaBarre, Paul .
IEEE PULSE, 2011, 2 (01) :18-25
[38]   Effect of sequence variation in Plasmodium falciparum Histidine-Rich protein 2 on binding of specific monoclonal antibodies:: Implications for rapid diagnostic tests for malaria [J].
Lee, Nelson ;
Baker, Joanne ;
Andrews, Kathy T. ;
Gatton, Michelle L. ;
Bell, David ;
Cheng, Qin ;
McCarthy, James .
JOURNAL OF CLINICAL MICROBIOLOGY, 2006, 44 (08) :2773-2778
[39]   Assessing the genetic diversity of the aldolase genes of Plasmodium falciparum and Plasmodium vivax and its potential effect on performance of aldolase-detectimz rapid diagnostic tests [J].
Lee, Nelson ;
Baker, Joanne ;
Be, David ;
McCarthy, James ;
Cheng, Qin .
JOURNAL OF CLINICAL MICROBIOLOGY, 2006, 44 (12) :4547-4549
[40]   Molecular diagnosis of malaria in the field:: development of a novel 1-step nucleic acid lateral flow immunoassay for the detection of all 4 human Plasmodium spp. and its evaluation in Mbita, Kenya [J].
Mens, Petra F. ;
van Amerongen, Aart ;
Sawa, Patrick ;
Kager, Piet A. ;
Schallig, Henk D. F. H. .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2008, 61 (04) :421-427