Instrument-free nucleic acid amplification assays for global health settings

被引:20
作者
LaBarre, Paul [1 ]
Boyle, David [1 ]
Hawkins, Kenneth [1 ]
Weigl, Bernhard [1 ]
机构
[1] PATH, Diagnost Grp, Seattle, WA 98121 USA
来源
SENSING TECHNOLOGIES FOR GLOBAL HEALTH, MILITARY MEDICINE, DISASTER RESPONSE, AND ENVIRONMENTAL MONITORING AND BIOMETRIC TECHNOLOGY FOR HUMAN IDENTIFICATION VIII | 2011年 / 8029卷
关键词
Low-resource settings; point of care diagnostics; non-instrumented diagnostics; infection detection; nucleic acid amplification; molecular diagnostics; sample preparation; laminar flow; MEDIATED ISOTHERMAL AMPLIFICATION; LATERAL FLOW DIPSTICK; HUMAN-IMMUNODEFICIENCY-VIRUS; RAPID DIAGNOSTIC-TESTS; HELICASE-DEPENDENT AMPLIFICATION; TAURA-SYNDROME VIRUS; DRIED BLOOD SPOTS; REVERSE-TRANSCRIPTION; PLASMODIUM-FALCIPARUM; DNA AMPLIFICATION;
D O I
10.1117/12.882868
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Many infectious diseases that affect global health are most accurately diagnosed through nucleic acid amplification and detection. However, existing nucleic acid amplification tests are too expensive and complex for most low-resource settings. The small numbers of centralized laboratories that exist in developing countries tend to be in urban areas and primarily cater to the affluent. In contrast, rural area health care facilities commonly have only basic equipment and health workers have limited training and little ability to maintain equipment and handle reagents. 1 Reliable electric power is a common infrastructure shortfall. In this paper, we discuss a practical approach to the design and development of non-instrumented molecular diagnostic tests that exploit the benefits of isothermal amplification strategies. We identify modular instrument-free technologies for sample collection, sample preparation, amplification, heating, and detection. By appropriately selecting and integrating these instrument-free modules, we envision development of an easy to use, infrastructure independent diagnostic test that will enable increased use of highly accurate molecular diagnostics at the point of care in low-resource settings.
引用
收藏
页数:15
相关论文
共 68 条
[1]   Characterization of a thermostable UvrD helicase and its participation in helicase-dependent amplification [J].
An, LX ;
Tang, W ;
Ranalli, TA ;
Kim, HJ ;
Wytiaz, J ;
Kong, HM .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (32) :28952-28958
[2]   Helicase-dependent amplification: use in OnChip amplification and potential for point-of-care diagnostics [J].
Andresen, Dennie ;
von Nickisch-Rosenegk, Markus ;
Bier, Frank F. .
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2009, 9 (07) :645-650
[3]   Development and Initial Results of a Low Cost, Disposable, Point-of-Care Testing Device for Pathogen Detection [J].
Bearinger, Jane P. ;
Dugan, Lawrence C. ;
Baker, Brian R. ;
Hall, Sara B. ;
Ebert, Katja ;
Mioulet, Valerie ;
Madi, Mikidache ;
King, Donald P. .
IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2011, 58 (03) :805-808
[4]  
Beddoe A, 2009, WORLD HLTH INN TECHN
[5]   Development of a loop-mediated isothermal amplification assay for rapid detection of BK virus [J].
Bista, Bipin Raj ;
Ishwad, Chandra ;
Wadowsky, Robert M. ;
Manna, Pradip ;
Randhawa, Parmjeet Singh ;
Gupta, Gaurav ;
Adhikari, Meena ;
Tyagi, Rakhi ;
Gasper, Gina ;
Vats, Abhay .
JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (05) :1581-1587
[6]   Operational feasibility of using loop-mediated isothermal amplification for diagnosis of pulmonary tuberculosis in microscopy centers of developing countries [J].
Boehme, Catharina C. ;
Nabeta, Pamela ;
Henostroza, German ;
Raqib, Rubhana ;
Rahim, Zeaur ;
Gerhardt, Martina ;
Sanga, Erica ;
Hoelscher, Michael ;
Notomi, Tsugunori ;
Hase, Tetsu ;
Perkins, Mark D. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (06) :1936-1940
[7]   Loop-Mediated Isothermal Amplification (LAMP) for Rapid Identification of Anopheles gambiae and Anopheles arabiensis Mosquitoes [J].
Bonizzoni, Mariangela ;
Afrane, Yaw ;
Yan, Guiyun .
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2009, 81 (06) :1030-1034
[8]  
Brassard J, 2009, CAN J MICROBIOL, V55, P1016, DOI [10.1139/W09-054, 10.1139/w09-054]
[9]  
BURGESS D, 2008, EVALUATION NEW RAPID
[10]  
BURGESS DC, 2006, NATURE S, pS1