Colwellia sediminilitoris sp nov., isolated from a tidal flat

被引:13
作者
Park, Sooyeon [1 ]
Jung, Yong-Taek [1 ,2 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
[2] UST, 113 Gwahak Ro, Daejeon, South Korea
关键词
RIBOSOMAL-RNA SEQUENCE; BACTERIAL SYSTEMATICS; GEN-NOV; IDENTIFICATION; SEDIMENT; STRAINS; LIPIDS; OCEAN;
D O I
10.1099/ijsem.0.001183
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, aerobic, motile and rod-shaped or ovoid bacterial strain, designated YSM-23(T), was isolated from a tidal flat on the South Sea in South Korea, and subjected to a polyphasic taxonomic study. Strain YSM-23(T) grew optimally at 30 degrees C, at pH 7.0-8.0 and in the presence of 1.0-2.0% (w/v) NaCl. The phylogenetic trees based on 16S rRNA gene sequences showed that strain YSM-23(T) represented a member of the genus Colwellia. Strain YSM-23(T) exhibited 16S rRNA gene sequence similarity values of 98.0, 97.4 and 97.3% to the type strains of Colwellia aestuarii, Colwellia polaris and Colwellia chukchiensis, respectively, and of 94.5-96.8% to the type strains of the other species of the genus Colwellia. Strain YSM-23(T) contained Q-8 as the predominant ubiquinone and summed feature 3 (C-16 : 1 omega 7c and/or C-16 : 1 omega 6c) as the major fatty acid. The major polar lipids detected in strain YSM-23T were phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content of strain YSM-23(T) was 43.8 +/- 0.08 mol% and its DNA-DNA relatedness values with the type strain of C. aestuarii, C. polaris and C. chukchiensis were 10 +/- 3.5-22 +/- 4.9 %. Differential phenotypic properties, together with its phylogenetic and genetic distinctiveness, revealed that strain YSM-23(T) is separated from species of the genus Colwellia with validly published names. On the basis of the data presented, strain YSM-23(T) is considered to represent a novel species of the genus Colwellia, for which the name Colwellia sediminilitoris sp. nov. is proposed. The type strain is YSM-23(T) (= KCTC 52213(T) = NBRC 111994(T)).
引用
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页码:3258 / 3263
页数:6
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