Selection and Validation of Reference Genes for RT-qPCR Analysis of the Ladybird Beetle Henosepilachna vigintioctomaculata

被引:80
|
作者
Lu, Jing [1 ]
Chen, Shimin [1 ]
Guo, Mujuan [1 ]
Ye, Cuiyi [1 ]
Qiu, Baoli [1 ]
Wu, Jianhui [1 ]
Yang, Chunxiao [2 ]
Pan, Huipeng [1 ]
机构
[1] South China Agr Univ, Key Lab Biopesticide Innovat & Applicat Guangdong, Dept Entomol, Guangzhou, Guangdong, Peoples R China
[2] South China Agr Univ, State Key Lab Conservat & Utilizat Subtrop Agrobi, Guangzhou, Guangdong, Peoples R China
基金
国家重点研发计划;
关键词
Henosepilachna vigintioctopunctata; RT-qPCR analysis; reference gene; RefFinder; geNorm; VIGINTIOCTOPUNCTATA F COLEOPTERA; PCR DATA; NORMALIZATION; COCCINELLIDAE; HOST;
D O I
10.3389/fphys.2018.01614
中图分类号
Q4 [生理学];
学科分类号
071003 ;
摘要
Reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) is a momentous technique for quantifying expression levels of the targeted genes across various biological processes. Selection and validation of appropriate reference genes for RT-qPCR analysis are a pivotal precondition for reliable expression measurement. Henosepilachna vigintioctopunctata is one of the most serious insect pests that attack Solanaceae plants in Asian countries. Recently, the transcriptomes of H. vigintioctopunctata were sequenced, promoting gene functional studies of this insect pest. Unfortunately, the reference genes for H. vigintioctopunctata have not been selected and validated. Here, a total of 7 commonly used reference genes, namely, Actin, GAPDH, RPL13, RPL6, RPL32, RPS18, and ATPB, were selected and assessed for suitability under four experimental conditions, namely, developmental stage, tissue, temperature, and host plant, using RefFinder, which integrates four different analytical tools (Normfinder, geNorm, the ACt method, and BestKeeper). The results displayed that RPL13 and RPS18 were the best suitable reference genes for each experimental condition. The relative transcript levels of 2 target genes, lov and TBX1 , varied greatly according to normalization with the two most- and least-suited reference genes. Our results will be helpful for improving the accuracy of the RT-qPCR analysis for future functional investigations of target gene expression in H. vigintioctopunctata.
引用
收藏
页数:11
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