Fluorescence in situ hybridization (FISH) with rRNA-targeted oligonucleotide probes

被引:430
作者
Pernthaler, J
Glöckner, FO
Schönhuber, W
Amann, R
机构
[1] Max Planck Inst Marine Microbiol, D-28359 Bremen, Germany
[2] Inst Pasteur, F-75724 Paris 15, France
来源
METHODS IN MICROBIOLOGY, VOL 30 | 2001年 / 30卷
关键词
D O I
10.1016/S0580-9517(01)30046-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
引用
收藏
页码:207 / 226
页数:20
相关论文
共 41 条
[1]   Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization [J].
Alfreider, A ;
Pernthaler, J ;
Amann, R ;
Sattler, B ;
Glockner, FO ;
Wille, A ;
Psenner, R .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (06) :2138-2144
[2]   Modern methods in subsurface microbiology: in situ identification of microorganisms with nucleic acid probes [J].
Amann, R ;
Glockner, FO ;
Neef, A .
FEMS MICROBIOLOGY REVIEWS, 1997, 20 (3-4) :191-200
[3]   In situ visualization of high genetic diversity in a natural microbial community [J].
Amann, R ;
Snaidr, J ;
Wagner, M ;
Ludwig, W ;
Schleifer, KH .
JOURNAL OF BACTERIOLOGY, 1996, 178 (12) :3496-3500
[4]   FLUORESCENT-OLIGONUCLEOTIDE PROBING OF WHOLE CELLS FOR DETERMINATIVE, PHYLOGENETIC, AND ENVIRONMENTAL-STUDIES IN MICROBIOLOGY [J].
AMANN, RI ;
KRUMHOLZ, L ;
STAHL, DA .
JOURNAL OF BACTERIOLOGY, 1990, 172 (02) :762-770
[5]   IDENTIFICATION OF INDIVIDUAL PROKARYOTIC CELLS BY USING ENZYME-LABELED, RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES [J].
AMANN, RI ;
ZARDA, B ;
STAHL, DA ;
SCHLEIFER, KH .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1992, 58 (09) :3007-3011
[6]   PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION [J].
AMANN, RI ;
LUDWIG, W ;
SCHLEIFER, KH .
MICROBIOLOGICAL REVIEWS, 1995, 59 (01) :143-169
[7]   COMBINATION OF 16S RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES WITH FLOW-CYTOMETRY FOR ANALYZING MIXED MICROBIAL-POPULATIONS [J].
AMANN, RI ;
BINDER, BJ ;
OLSON, RJ ;
CHISHOLM, SW ;
DEVEREUX, R ;
STAHL, DA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1990, 56 (06) :1919-1925
[8]   The domain-specific probe EUB338 is insufficient for the detection of all Bacteria:: Development and evaluation of a more comprehensive probe set [J].
Daims, H ;
Brühl, A ;
Amann, R ;
Schleifer, KH ;
Wagner, M .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1999, 22 (03) :434-444
[9]  
DeLong E.F., 1993, HDB METHODS AQUATIC, P285
[10]   PHYLOGENETIC STAINS - RIBOSOMAL RNA-BASED PROBES FOR THE IDENTIFICATION OF SINGLE CELLS [J].
DELONG, EF ;
WICKHAM, GS ;
PACE, NR .
SCIENCE, 1989, 243 (4896) :1360-1363