Quantum chemical excited state calculations on pigment-protein complexes require thorough geometry re-optimization of experimental crystal structures

被引:48
作者
Dreuw, Andreas [1 ]
Harbach, Philipp H. P. [1 ]
Mewes, Jan M. [1 ]
Wormit, Michael [1 ]
机构
[1] Goethe Univ Frankfurt, Inst Phys & Theoret Chem, D-60438 Frankfurt, Germany
关键词
Light harvesting complexes; Geometry optimization; Quantum chemical calculations; Excited states; Excitation energy transfer; Electron transfer; Crystal structures; DENSITY-FUNCTIONAL THEORY; LIGHT-HARVESTING COMPLEX; RADICAL-CATION FORMATION; ENERGY-DISSIPATION; EXCITATION; PHOTOPROTECTION; MECHANISM; QM/MM;
D O I
10.1007/s00214-009-0680-3
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Calculations of vertical excited states of a strongly coupled chlorophyll pair and a carotenoid-chlorophyll complex stemming from the light harvesting complex II of green plants employing the experimentally determined crystal structures and quantum chemically re-optimized model complexes demonstrate the need for preceding re-optimizations of the experimental structures at quantum chemical level. While in the case of the chlorophyll dimers, the re-optimization step is crucial for a correct description of the coupling of the excited states, in carotenoid-chlorophyll complexes the S-1 excitation energies of carotenoids depend strongly on the structure, in particular on the correct bond lengths alternation pattern of its conjugated double bond chain, which is not sufficiently accurately reproduced by experimental structures.
引用
收藏
页码:419 / 426
页数:8
相关论文
共 37 条
[1]   Molecular recognition in thylakoid structure and function [J].
Allen, JF ;
Forsberg, J .
TRENDS IN PLANT SCIENCE, 2001, 6 (07) :317-326
[2]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[3]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[4]  
Casida M., 1995, RECENT ADV DENSITY F RECENT ADV DENSITY F, DOI [10.1142/9789812830586, DOI 10.1142/9789812830586]
[5]   PHOTOINHIBITION AND ZEAXANTHIN FORMATION IN INTACT LEAVES - A POSSIBLE ROLE OF THE XANTHOPHYLL CYCLE IN THE DISSIPATION OF EXCESS LIGHT ENERGY [J].
DEMMIG, B ;
WINTER, K ;
KRUGER, A ;
CZYGAN, FC .
PLANT PHYSIOLOGY, 1987, 84 (02) :218-224
[6]   Chlorophyll fluorescence quenching by xanthophylls [J].
Dreuw, A ;
Fleming, GR ;
Head-Gordon, M .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2003, 5 (15) :3247-3256
[7]   Long-range charge-transfer excited states in time-dependent density functional theory require non-local exchange [J].
Dreuw, A ;
Weisman, JL ;
Head-Gordon, M .
JOURNAL OF CHEMICAL PHYSICS, 2003, 119 (06) :2943-2946
[8]   Charge-transfer state as a possible signature of a zeaxanthin-chlorophyll dimer in the non-photochemical quenching process in green plants [J].
Dreuw, A ;
Fleming, GR ;
Head-Gordon, M .
JOURNAL OF PHYSICAL CHEMISTRY B, 2003, 107 (27) :6500-6503
[9]   Single-reference ab initio methods for the calculation of excited states of large molecules [J].
Dreuw, A ;
Head-Gordon, M .
CHEMICAL REVIEWS, 2005, 105 (11) :4009-4037
[10]   Failure of time-dependent density functional theory for long-range charge-transfer excited states: The zincbacteriochlorin-bacterlochlorin and bacteriochlorophyll-spheroidene complexes [J].
Dreuw, A ;
Head-Gordon, M .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (12) :4007-4016