Selectivity of montmorillonite catalyzed prebiotic reactions of D, L-nucleotides

被引:32
作者
Joshi, Prakash C.
Pitsch, Stefan
Ferris, James P. [1 ]
机构
[1] Rensselaer Polytech Inst, Dept Chem & Chem Biol, Troy, NY 12180 USA
[2] Rensselaer Polytech Inst, NU Ctr Studies Origins Life, Troy, NY 12180 USA
[3] Ecole Polytech Fed Lausanne, Inst Organ Chem, BCH, CH-1015 Lausanne, Switzerland
来源
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES | 2007年 / 37卷 / 01期
关键词
montmorillonite; catalysis; chiral; RNA; origin of life; prebiotic;
D O I
10.1007/s11084-006-9013-x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The montmorillonite-catalyzed reactions of the 5'-phosphorimidazolides of D, L-adenosine (D, L-ImpA) (Figure 1a. N = A, R = H) and D, L-uridine (Figure 1a., N = U, R = H) yields oligomers that were as long as 7 mers and 6 mers, respectively. The reactions of dilute solutions of D-ImpA and D-ImpU under the same conditions gave oligomers as long as 9 and 8 mers respectively. This demonstrated that oligomer formation is only partially inhibited by incorporation of both the D- and L-enantiomers. The structures of the dimers, trimers and tetramer fractions formed from D, L-ImpA was investigated by selective enzymatic hydrolysis, comparison with authentic samples and mass spectrometry. Homochiral products were present in greater amounts than would be expected if theoretical amounts of each were formed. The ratio of the proportion of homochiral products to that of the amount of each expected for the dimers (cyclic and linear), trimers and tetramers, was 1.3, 1.6, and 2.1, respectively. In the D, L-ImpU reaction homochiral products did not predominate with ratios of dimers (cyclic and linear), trimers and tetramers 0.8, 0.44, and 1.4, respectively. The proportions of cyclic dimers in the dimer fraction were 52-66% with D, L-ImpA and 44-69% with D, L-ImpU. No cyclic dimers were formed in the absence of montmorillonite. The differences in the reaction products of D, L-ImpA and D, L-ImpU are likely to be due to the difference in the orientations of the activated monomers when bound to the catalytic sites on montmorillonite. The consequences of the selectivity of montmorillonite as a prebiotic catalyst are discussed.
引用
收藏
页码:3 / 26
页数:24
相关论文
共 35 条
[21]   Dimerization in highly concentrated solutions of phosphoimidazolide activated mononucleotides [J].
Kanavarioti, A .
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 1997, 27 (04) :357-376
[22]   Clay catalysis of oligonucleotide formation:: Kinetics of the reaction of the 5′-phosphorimidazolides of nucleotides with the non-basic heterocycles uracil and hypoxanthine [J].
Kawamura, K ;
Ferris, JP .
ORIGINS OF LIFE AND EVOLUTION OF THE BIOSPHERE, 1999, 29 (06) :563-591
[23]   CLAY-ORGANIC STUDIES .12. ABSORPTION OF PYRIMIDINES PURINES AND NUCLEOSIDES BY LI- NA- MG- AND CA-MONTMORILLONITE [J].
LAILACH, GE ;
THOMPSON, TD ;
BRINDLEY, GW .
CLAYS AND CLAY MINERALS, 1968, 16 (04) :285-&
[24]   PREFERENTIAL FORMATION OF (2'-5')-LINKED INTERNUCLEOTIDE BONDS IN NON-ENZYMATIC REACTIONS [J].
LOHRMANN, R ;
ORGEL, LE .
TETRAHEDRON, 1978, 34 (07) :853-855
[25]   Sequence- and regioselectivity in the montmorillonite-catalyzed synthesis of RNA [J].
Miyakawa, S ;
Ferris, JP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (27) :8202-8208
[26]   The cold origin of life: B. Implications based on pyrimidines and purines produced from frozen ammonium cyanide solutions [J].
Miyakawa, S ;
Cleaves, HJ ;
Miller, SL .
ORIGINS OF LIFE AND EVOLUTION OF THE BIOSPHERE, 2002, 32 (03) :209-218
[27]   EVOLUTION OF GENETIC APPARATUS [J].
ORGEL, LE .
JOURNAL OF MOLECULAR BIOLOGY, 1968, 38 (03) :381-&
[28]   SYNTHESIS OF ADENINE FROM AMMONIUM CYANIDE [J].
ORO, J .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1960, 2 (06) :407-412
[29]   Chiral selection in oligoadenylate formation in the presence of a metal ion catalyst or poly(U) template [J].
Osawa, K ;
Urata, H ;
Sawai, H .
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 2005, 35 (03) :213-223
[30]   Adenine derivatives as phosphate-activating groups for the regioselective formation of 3',5'-linked oligoadenylates on montmorillonite: Possible phosphate-activating groups for the prebiotic synthesis of RNA [J].
Prabahar, KJ ;
Ferris, JP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (19) :4330-4337