Pseudogene PHBP1 promotes esophageal squamous cell carcinoma proliferation by increasing its cognate gene PHB expression

被引:19
作者
Feng, Feiyue [1 ,2 ]
Qiu, Bin [1 ,2 ]
Zang, Ruochuan [1 ,2 ]
Song, Peng [1 ,2 ]
Gao, Shugeng [1 ,2 ]
机构
[1] Chinese Acad Med Sci, Canc Hosp, Natl Canc Ctr, Dept Thorac Surg, Beijing 100021, Peoples R China
[2] Peking Union Med Coll, Beijing 100021, Peoples R China
关键词
natural antisense transcript (NAT); long noncoding RNA (lncRNA); esophageal squamous cell carcinoma (ESCC); quantitative real-time PCR (qRT-PCR); SDS-polyacrylamide gel electrophoresis (SDS-PAGE); NATURAL ANTISENSE TRANSCRIPTS; X-INACTIVATION CENTER; LONG NONCODING RNAS; COLORECTAL-CARCINOMA; PROHIBITIN; IDENTIFICATION; CANCER; MIGRATION; BIOMARKER; PRODUCT;
D O I
10.18632/oncotarget.16196
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Natural antisense transcripts (NATs) as one of the most diverse classes of long noncoding RNAs (lncRNAs), have been demonstrated involved in fundamental biological processes in human. Here, we reported that human prohibitin gene pseudogene 1 (PHBP1) was upregulated in ESCC, and increased PHBP1 expression in ESCC was associated with clinical advanced stage. Functional experiments showed that PHBP1 knockdown inhibited ESCC cells proliferation, colony formation and xenograft tumor growth in vitro and in vivo by causing cell-cycle arrest at the G1-G0 phase. Mechanisms analysis revealed that PHBP1 transcript as an antisense transcript of PHB is partially complementary to PHB mRNA and formed an RNA-RNA hybrid with PHB, consequently inducing an increase of PHB expression at both the mRNA and protein levels. Furthermore, PHBP1 expression is strongly correlated with PHB expression in ESCC tissues. Collectively, this study elucidates an important role of PHBP1 in promoting ESCC partly via increasing PHB expression.
引用
收藏
页码:29091 / 29100
页数:10
相关论文
共 44 条
[1]   Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [J].
Birney, Ewan ;
Stamatoyannopoulos, John A. ;
Dutta, Anindya ;
Guigo, Roderic ;
Gingeras, Thomas R. ;
Margulies, Elliott H. ;
Weng, Zhiping ;
Snyder, Michael ;
Dermitzakis, Emmanouil T. ;
Stamatoyannopoulos, John A. ;
Thurman, Robert E. ;
Kuehn, Michael S. ;
Taylor, Christopher M. ;
Neph, Shane ;
Koch, Christoph M. ;
Asthana, Saurabh ;
Malhotra, Ankit ;
Adzhubei, Ivan ;
Greenbaum, Jason A. ;
Andrews, Robert M. ;
Flicek, Paul ;
Boyle, Patrick J. ;
Cao, Hua ;
Carter, Nigel P. ;
Clelland, Gayle K. ;
Davis, Sean ;
Day, Nathan ;
Dhami, Pawandeep ;
Dillon, Shane C. ;
Dorschner, Michael O. ;
Fiegler, Heike ;
Giresi, Paul G. ;
Goldy, Jeff ;
Hawrylycz, Michael ;
Haydock, Andrew ;
Humbert, Richard ;
James, Keith D. ;
Johnson, Brett E. ;
Johnson, Ericka M. ;
Frum, Tristan T. ;
Rosenzweig, Elizabeth R. ;
Karnani, Neerja ;
Lee, Kirsten ;
Lefebvre, Gregory C. ;
Navas, Patrick A. ;
Neri, Fidencio ;
Parker, Stephen C. J. ;
Sabo, Peter J. ;
Sandstrom, Richard ;
Shafer, Anthony .
NATURE, 2007, 447 (7146) :799-816
[2]   Dataset of natural antisense transcripts in P. vivax clinical isolates derived using custom designed strand-specific microarray [J].
Boopathi, P. A. ;
Subudhi, Amit Kumar ;
Garg, Shilpi ;
Middha, Sheetal ;
Acharya, Jyoti ;
Pakalapati, Deepak ;
Saxena, Vishal ;
Aiyaz, Mohammed ;
Chand, Bipin ;
Mugasimangalam, Raja C. ;
Kochar, Sanjay K. ;
Sirohi, Parmendra ;
Kochar, Dhanpat K. ;
Das, Ashis .
GENOMICS DATA, 2014, 2 :199-201
[3]   THE PRODUCT OF THE H19 GENE MAY FUNCTION AS AN RNA [J].
BRANNAN, CI ;
DEES, EC ;
INGRAM, RS ;
TILGHMAN, SM .
MOLECULAR AND CELLULAR BIOLOGY, 1990, 10 (01) :28-36
[4]   A GENE FROM THE REGION OF THE HUMAN X-INACTIVATION CENTER IS EXPRESSED EXCLUSIVELY FROM THE INACTIVE X-CHROMOSOME [J].
BROWN, CJ ;
BALLABIO, A ;
RUPERT, JL ;
LAFRENIERE, RG ;
GROMPE, M ;
TONLORENZI, R ;
WILLARD, HF .
NATURE, 1991, 349 (6304) :38-44
[5]   Cutting Edge: A Natural Antisense Transcript, AS-IL1α, Controls Inducible Transcription of the Proinflammatory Cytokine IL-1α [J].
Chan, Jennie ;
Atianand, Maninjay ;
Jiang, Zhaozhao ;
Carpenter, Susan ;
Aiello, Daniel ;
Elling, Roland ;
Fitzgerald, Katherine A. ;
Caffrey, Daniel R. .
JOURNAL OF IMMUNOLOGY, 2015, 195 (04) :1359-1363
[6]   Identification of prohibitin as a potential biomarker for colorectal carcinoma based on proteomics technology [J].
Chen, Debo ;
Chen, Fenglin ;
Lu, Xingrong ;
Yang, Xiaosong ;
Xu, Zhongbin ;
Pan, Jie ;
Huang, Ying ;
Lin, Huiming ;
Chi, Pan .
INTERNATIONAL JOURNAL OF ONCOLOGY, 2010, 37 (02) :355-365
[7]   Long non-coding RNA FEZF1-AS1 facilitates cell proliferation and migration in colorectal carcinoma [J].
Chen, Na ;
Guo, Dan ;
Xu, Qiong ;
Yang, Minhui ;
Wang, Dan ;
Peng, Man ;
Ding, Yanqing ;
Wang, Shuang ;
Zhou, Jun .
ONCOTARGET, 2016, 7 (10) :11271-11283
[8]  
Chen ZH, 2016, AM J TRANSL RES, V8, P4106
[9]  
Chuang WY, 2015, INT J CLIN EXP PATHO, V8, P9248
[10]   Long noncoding RNAs in cell biology [J].
Clark, Michael B. ;
Mattick, John S. .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2011, 22 (04) :366-376