Joint Optimization of CycleGAN and CNN Classifier for Detection and Localization of Retinal Pathologies on Color Fundus Photographs

被引:22
作者
Zhang, Ziyue [1 ]
Ji, Zexuan [1 ]
Chen, Qiang [1 ]
Yuan, Songtao [2 ]
Fan, Wen [2 ]
机构
[1] Nanjing Univ Sci & Technol, Sch Comp Sci & Engn, Nanjing 210094, Peoples R China
[2] Nanjing Med Univ, Dept Ophthalmol, Afflicted Hosp 1, Nanjing 210029, Peoples R China
基金
中国国家自然科学基金;
关键词
Lesions; Generators; Biomarkers; Retina; Diseases; Generative adversarial networks; Feature extraction; Fundus photography; detection; biomarker localization; CycleGAN; joint optimization; OPTIC DISC; SEGMENTATION; MYOPIA;
D O I
10.1109/JBHI.2021.3092339
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Retinal related diseases are the leading cause of vision loss, and severe retinal lesion causes irreversible damage to vision. Therefore, the automatic methods for retinal diseases detection based on medical images is essential for timely treatment. Considering that manual diagnosis and analysis of medical images require a large number of qualified experts, deep learning can effectively diagnosis and locate critical biomarkers. In this paper, we present a novel model by jointly optimize the cycle generative adversarial network (CycleGAN) and the convolutional neural network (CNN) to detect retinal diseases and localize lesion areas with limited training data. The CycleGAN with cycle consistency can generate more realistic and reliable images. The discriminator and the generator achieve a local optimal solution in an adversarial manner, and the generator and the classifier are in a cooperative manner to distinguish the domain of input images. A novel res-guided sampling block is proposed by combining learnable residual features and pixel-adaptive convolutions. A res-guided U-Net is constructed as the generator by substituting the traditional convolution with the res-guided sampling blocks. Our model achieve superior classification and localization performance on LAG, Ichallenge-PM and Ichallenge-AMD datasets. With clear localization for lesion areas, the competitive results reveal great potentials of the joint optimization network. The source code is available at https://github.com/jizexuan/JointOptmization.
引用
收藏
页码:115 / 126
页数:12
相关论文
共 36 条
[21]   Pathologic Myopia [J].
Ohno-Matsui, Kyoko .
ASIA-PACIFIC JOURNAL OF OPHTHALMOLOGY, 2016, 5 (06) :415-423
[22]   DeepSeeNet: A Deep Learning Model for Automated Classification of Patient-based Age-related Macular Degeneration Severity from Color Fundus Photographs [J].
Peng, Yifan ;
Dharssi, Shazia ;
Chen, Qingyu ;
Keenan, Tiarnan D. ;
Agron, Elvira ;
Wong, Wai T. ;
Chew, Emily Y. ;
Lu, Zhiyong .
OPHTHALMOLOGY, 2019, 126 (04) :565-575
[23]   Segmentation of the foveal microvasculature using deep learning networks [J].
Prentasic, Pavle ;
Heisler, Morgan ;
Mammo, Zaid ;
Lee, Sieun ;
Merkur, Andrew ;
Navajas, Eduardo ;
Beg, Mirza Faisal ;
Sarunic, Marinko ;
Loncaric, Sven .
JOURNAL OF BIOMEDICAL OPTICS, 2016, 21 (07)
[24]  
Radford A., 2015, Unsupervised representation learning with deep convolutional generative adversarial networks
[25]   Age-related macular degenerationclinical review and genetics update [J].
Ratnapriya, R. ;
Chew, E. Y. .
CLINICAL GENETICS, 2013, 84 (02) :160-166
[26]   U-Net: Convolutional Networks for Biomedical Image Segmentation [J].
Ronneberger, Olaf ;
Fischer, Philipp ;
Brox, Thomas .
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, PT III, 2015, 9351 :234-241
[27]   Detail-Preserving Pooling in Deep Networks [J].
Saeedan, Faraz ;
Weber, Nicolas ;
Goesele, Michael ;
Roth, Stefan .
2018 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2018, :9108-9116
[28]  
Saxena Arkaja, 2020, 2020 International Conference on Electronics and Sustainable Communication Systems (ICESC). Proceedings, P815, DOI 10.1109/ICESC48915.2020.9155930
[29]   f-AnoGAN: Fast unsupervised anomaly detection with generative adversarial networks [J].
Schlegl, Thomas ;
Seebock, Philipp ;
Waldstein, Sebastian M. ;
Langs, Georg ;
Schmidt-Erfurth, Ursula .
MEDICAL IMAGE ANALYSIS, 2019, 54 :30-44
[30]  
Siddiquee MMR, 2019, IEEE I CONF COMP VIS, P191, DOI [10.1109/ICCV.2019.00028, 10.1109/iccv.2019.00028]