Circadian and Sleep Metabolomics Across Species

被引:28
作者
Malik, Dania M. [1 ,2 ,3 ]
Paschos, Georgios K. [2 ,3 ]
Sehgal, Amita [4 ,5 ]
Weljie, Aalim M. [2 ,3 ]
机构
[1] Univ Penn, Pharmacol Grad Grp, Philadelphia, PA 19104 USA
[2] Univ Penn, Dept Syst Pharmacol & Translat Therapeut, Philadelphia, PA 19104 USA
[3] Univ Penn, Inst Translat Med & Therapeut, Philadelphia, PA 19104 USA
[4] Univ Penn, Penn Chronobiol, Philadelphia, PA 19104 USA
[5] Univ Penn, Howard Hughes Med Inst, Perelman Sch Med, Philadelphia, PA 19104 USA
基金
美国国家卫生研究院;
关键词
circadian clocks; LC-MS; NMR; chronometabolomics; diurnal rhythms; CLOCK GENE-EXPRESSION; MASS-SPECTROMETRY; CAENORHABDITIS-ELEGANS; GLUCOSE-METABOLISM; NMR-SPECTROSCOPY; CYCLIC CHANGES; PLASMA-LIPIDS; LC-MS; RHYTHMS; TIME;
D O I
10.1016/j.jmb.2020.04.027
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Under normal circadian function, metabolic control is temporally coordinated across tissues and behaviors with a 24-h period. However, circadian disruption results in negative consequences for metabolic homeostasis including energy or redox imbalances. Yet, circadian disruption has become increasingly prevalent within today's society due to many factors including sleep loss. Metabolic consequences of both have been revealed by metabolomics analyses of circadian biology and sleep. Specifically, two primary analytical platforms, mass spectrometry and nuclear magnetic resonance spectroscopy, have been used to study molecular clock and sleep influences on overall metabolic rhythmicity. For example, human studies have demonstrated the prevalence of metabolic rhythms in human biology, as well as pan-metabolome consequences of sleep disruption. However, human studies are limited to peripheral metabolic readouts primarily through minimally invasive procedures. For further tissue- and organism-specific investigations, a number of model systems have been studied, based upon the conserved nature of both the molecular clock and sleep across species. Here we summarize human studies as well as key findings from metabolomics studies using mice, Drosophila, and zebrafish. While informative, a limitation in existing literature is a lack of interpretation regarding dynamic synthesis or catabolism within metabolite pools. To this extent, future work incorporating isotope tracers, specific metabolite reporters, and single-cell metabolomics may provide a means of exploring dynamic activity in pathways of interest. (C) 2020 Elsevier Ltd. All rights reserved.
引用
收藏
页码:3578 / 3610
页数:33
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