Multi-species temporal network of livestock movements for disease spread

被引:8
作者
Ruget, Anne-Sophie [1 ]
Rossi, Gianluigi [1 ]
Pepler, P. Theo [2 ]
Beaunee, Gael [1 ,3 ]
Banks, Christopher J. [1 ]
Enright, Jessica [4 ]
Kao, Rowland R. [1 ,5 ]
机构
[1] Univ Edinburgh, Roslin Inst, Easter Bush Campus, Edinburgh, Midlothian, Scotland
[2] Univ Glasgow, Inst Biodivers Anim Hlth & Comparat Med, Glasgow G12 8QQ, Lanark, Scotland
[3] BIOEPAR, Oniris, INRAE, F-44300 Nantes, France
[4] Univ Glasgow, Sch Comp Sci, Glasgow G12 8QQ, Lanark, Scotland
[5] Univ Edinburgh, Royal Dick Sch Vet Studies, Edinburgh, Midlothian, Scotland
基金
英国生物技术与生命科学研究理事会;
关键词
Livestock movements; Multi-species; Network analysis; Temporal network; Stochastic simulations; MOUTH-DISEASE; BOVINE TUBERCULOSIS; CATTLE MOVEMENTS; ANIMAL MOVEMENTS; GREAT-BRITAIN; DYNAMICS; EPIDEMIC; CENTRALITY; PATTERN; IMPACT;
D O I
10.1007/s41109-021-00354-x
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
Introduction The objective of this study is to show the importance of interspecies links and temporal network dynamics of a multi-species livestock movement network. Although both cattle and sheep networks have been previously studied, cattle-sheep multi-species networks have not generally been studied in-depth. The central question of this study is how the combination of cattle and sheep movements affects the potential for disease spread on the combined network. Materials and methods Our analysis considers static and temporal representations of networks based on recorded animal movements. We computed network-based node importance measures of two single-species networks, and compared the top-ranked premises with the ones in the multi-species network. We propose the use of a measure based on contact chains calculated in a network weighted with transmission probabilities to assess the importance of premises in an outbreak. To ground our investigation in infectious disease epidemiology, we compared this suggested measure with the results of disease simulation models with asymmetric probabilities of transmission between species. Results Our analysis of the temporal networks shows that the premises which are likely to drive the epidemic in this multi-species network differ from the ones in both the cattle and the sheep networks. Although sheep movements are highly seasonal, the estimated size of an epidemic is significantly larger in the multi-species network than in the cattle network, independently of the period of the year. Finally, we demonstrate that a measure based on contact chains allow us to identify around 30% of the key farms in a simulated epidemic, ignoring markets, whilst static network measures identify less than 10% of these farms. Conclusion Our results ascertain the importance of combining species networks, as well as considering layers of temporal livestock movements in detail for the study of disease spread.
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页数:20
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