Biodiversity of fungi in hot desert sands

被引:42
作者
Murgia, Manuela [1 ]
Fiamma, Maura [1 ]
Barac, Aleksandra [2 ]
Deligios, Massimo [1 ]
Mazzarello, Vittorio [1 ]
Paglietti, Bianca [1 ]
Cappuccinelli, Pietro [1 ]
Al-Qahtani, Ahmed [3 ]
Squartini, Andrea [4 ]
Rubino, Salvatore [1 ,3 ]
Al-Ahdal, Mohammed N. [3 ]
机构
[1] Univ Sassari, Dept Biomed Sci, Sassari, Italy
[2] Univ Belgrade, Clin Infect & Trop Dis, Clin Ctr Serbia, Fac Med, Belgrade, Serbia
[3] King Faisal Specialist Hosp & Res Ctr, Dept Infect & Immun, Riyadh, Saudi Arabia
[4] Univ Padua, Dept Agron Anim Food Nat Resources & Environm, DAFNAE, Padua, Italy
关键词
biodiversity; desert; fungi; sand; Saudi Arabia; SOILS; DIVERSITY; COMMUNITIES; FUSARIUM; PHYLOGENY; SEARCH; SPP;
D O I
10.1002/mbo3.595
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The fungal community of six sand samples from Saudi Arabia and Jordan deserts was characterized by culture-independent analysis via next generation sequencing of the 18S rRNA genes and by culture-dependent methods followed by sequencing of internal transcribed spacer (ITS) region. By 18S sequencing were identified from 163 to 507 OTUs per sample, with a percentage of fungi ranging from 3.5% to 82.7%. The identified fungal Phyla were Ascomycota, Basal fungi, and Basidiomycota and the most abundant detected classes were Dothideomycetes, Pezizomycetes, and Sordariomycetes. A total of 11 colonies of filamentous fungi were isolated and cultured from six samples, and the ITS sequencing pointed toward five different species of the class Sordariomycetes, belonging to genera Fusarium (F. redolens, F. solani, F. equiseti), Chaetomium (C. madrasense), and Albifimbria (A. terrestris). The results of this study show an unexpectedly large fungal biodiversity in the Middle East desert sand and their possible role and implications on human health.
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页数:10
相关论文
共 49 条
[1]   CELLULOSE-DECOMPOSING FUNGI OF DESERT SOILS IN SAUDI-ARABIA [J].
ABDELHAFEZ, SII .
MYCOPATHOLOGIA, 1982, 78 (02) :73-78
[2]   THERMOPHILIC AND THERMOTOLERANT FUNGI IN THE DESERT SOILS OF SAUDI-ARABIA [J].
ABDELHAFEZ, SII .
MYCOPATHOLOGIA, 1982, 80 (01) :15-20
[3]   SURVEY OF THE MYCOFLORA OF DESERT SOILS IN SAUDI-ARABIA [J].
ABDELHAFEZ, SII .
MYCOPATHOLOGIA, 1982, 80 (01) :3-8
[4]   OSMOPHILIC FUNGI OF DESERT SOILS IN SAUDI-ARABIA [J].
ABDELHAFEZ, SII .
MYCOPATHOLOGIA, 1982, 80 (01) :9-14
[5]   HALOPHILIC FUNGI OF DESERT SOILS IN SAUDI-ARABIA [J].
ABDELHAFEZ, SII .
MYCOPATHOLOGIA, 1981, 75 (02) :75-80
[6]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[7]   454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity [J].
Buee, M. ;
Reich, M. ;
Murat, C. ;
Morin, E. ;
Nilsson, R. H. ;
Uroz, S. ;
Martin, F. .
NEW PHYTOLOGIST, 2009, 184 (02) :449-456
[8]   QIIME allows analysis of high-throughput community sequencing data [J].
Caporaso, J. Gregory ;
Kuczynski, Justin ;
Stombaugh, Jesse ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
Costello, Elizabeth K. ;
Fierer, Noah ;
Pena, Antonio Gonzalez ;
Goodrich, Julia K. ;
Gordon, Jeffrey I. ;
Huttley, Gavin A. ;
Kelley, Scott T. ;
Knights, Dan ;
Koenig, Jeremy E. ;
Ley, Ruth E. ;
Lozupone, Catherine A. ;
McDonald, Daniel ;
Muegge, Brian D. ;
Pirrung, Meg ;
Reeder, Jens ;
Sevinsky, Joel R. ;
Tumbaugh, Peter J. ;
Walters, William A. ;
Widmann, Jeremy ;
Yatsunenko, Tanya ;
Zaneveld, Jesse ;
Knight, Rob .
NATURE METHODS, 2010, 7 (05) :335-336
[9]   Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern [J].
Casamayor, EO ;
Massana, R ;
Benlloch, S ;
Ovreås, L ;
Díez, B ;
Goddard, VJ ;
Gasol, JM ;
Joint, I ;
Rodríguez-Valera, F ;
Pedrós-Alió, C .
ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (06) :338-348
[10]   The rising trend of invasive zygomycosis in patients with uncontrolled diabetes mellitus [J].
Chakrabarti, Arunaloke ;
Das, Ashim ;
Mandal, Jharna ;
Shivaprakash, M. R. ;
George, Varghese K. ;
Tarai, Bansidhar ;
Rao, Pooja ;
Panda, Naresh ;
Verma, Subhash C. ;
Sakhuja, Vinay .
MEDICAL MYCOLOGY, 2006, 44 (04) :335-342