Overlapping Local and Long-Range RNA-RNA Interactions Modulate Dengue Virus Genome Cyclization and Replication

被引:65
作者
de Borba, Luana [1 ]
Villordo, Sergio M. [1 ]
Iglesias, Nestor G. [1 ]
Filomatori, Claudia V. [1 ]
Gebhard, Leopoldo G. [1 ]
Gamarnik, Andrea V. [1 ]
机构
[1] Consejo Nacl Invest Cient & Tecn, Fdn Inst Leloir, RA-1033 Buenos Aires, DF, Argentina
关键词
VIRAL-RNA; 3'-NONCODING REGION; ELEMENT; TRANSLATION; PROTEINS; PREDICTION; MOSQUITO; REVEALS; MOTIFS; SYSTEM;
D O I
10.1128/JVI.02677-14
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The dengue virus genome is a dynamic molecule that adopts different conformations in the infected cell. Here, using RNA folding predictions, chemical probing analysis, RNA binding assays, and functional studies, we identified new cis-acting elements present in the capsid coding sequence that facilitate cyclization of the viral RNA by hybridization with a sequence involved in a local dumbbell structure at the viral 3' untranslated region (UTR). The identified interaction differentially enhances viral replication in mosquito and mammalian cells.
引用
收藏
页码:3430 / 3437
页数:8
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