Quantitative analysis of cell-free DNA in the plasma of gastric cancer patients

被引:77
作者
Park, Jong-Lyul [1 ,2 ]
Kim, Hyun Ja [3 ]
Choi, Bo Youl [3 ]
Lee, Han-Chul [1 ]
Jang, Hay-Ran [1 ]
Song, Kyu Sang [4 ]
Noh, Seung-Moo [5 ]
Kim, Seon-Young [1 ,2 ]
Han, Dong Soo [6 ]
Kim, Yong Sung [1 ,2 ]
机构
[1] Korea Res Inst Biosci & Biotechnol, Med Genom Res Ctr, Taejon 305806, South Korea
[2] Univ Sci & Technol, Dept Funct Genom, Taejon 305806, South Korea
[3] Hanyang Univ, Coll Med, Dept Prevent Med, Seoul 133791, South Korea
[4] Chungnam Natl Univ, Dept Pathol, Taejon 301747, South Korea
[5] Chungnam Natl Univ, Dept Gen Surg, Taejon 301747, South Korea
[6] Hanyang Univ, Guri Hosp, Dept Internal Med, Gyeonggi Do 471701, South Korea
基金
新加坡国家研究基金会;
关键词
gastric cancer; cell-free DNA; serum; plasma; Alu sequence; FREE CIRCULATING DNA; LUNG-CANCER; PROSTATE-CANCER; ALLELIC IMBALANCE; DIAGNOSTIC MARKER; TUMOR DNA; SERUM; BLOOD; QUANTIFICATION; INFLAMMATION;
D O I
10.3892/ol.2012.592
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
In the present study, an accurate and reproducible method for quantifying cell-free DNA (cfDNA) in human blood was established and tested for its ability to predict gastric cancer in patients. Using 'Alu81-qPCR' to amplify 81-bp Alu DNA sequences, we first estimated the amount of cfDNA in the serum or plasma of 130 patients with gastric cancer to identify which source of cfDNA is more suitable for the biomarker screening of these patients. The results of Alu81-qPCR revealed that the amount of cfDNA in the plasma was low compared with that in the serum, but was found at similar levels among the samples, indicating that the plasma may be a more suitable source of cfDNA for biomarker screening. For the 54 patients with gastric cancer and the 59 age-matched healthy controls, the mean levels of plasma cfDNA were 2.4-fold higher in the patient group compared with the control group, indicating that plasma cfDNA levels may be useful for predicting patients with gastric cancer. The results of our study suggest that Alu81-qPCR is a more reliable method than other techniques, such as the PicoGreen assay, for quantifying cfDNA in human blood, demonstrating the potential to complement current diagnostic procedures for the management of gastric cancer patients.
引用
收藏
页码:921 / 926
页数:6
相关论文
共 31 条
[1]   Role of cell-free plasma DNA as a diagnostic marker for prostate cancer [J].
Allen, D ;
Butt, A ;
Cahill, D ;
Wheeler, M ;
Popert, R ;
Swaminathan, R .
CIRCULATING NUCLEIC ACIDS IN PLASMA/SERUM III AND SERUM PROTEOMICS, 2004, 1022 :76-80
[2]   Increased concentrations of cell-free plasma DNA after exhaustive exercise [J].
Atamaniuk, J ;
Vidotto, C ;
Tschan, H ;
Bachl, N ;
Stuhlmeier, KM ;
Müller, MM .
CLINICAL CHEMISTRY, 2004, 50 (09) :1668-1670
[3]   Quantitative analysis of circulating methylated DNA as a biomarker for hepatocellular carcinoma [J].
Chan, K. C. Allen ;
Lai, Paul B. S. ;
Mok, Tony S. K. ;
Chan, Henry L. Y. ;
Ding, Chunming ;
Yeung, S. W. ;
Lo, Y. M. Dennis .
CLINICAL CHEMISTRY, 2008, 54 (09) :1528-1536
[4]   Effects of preanalytical factors on the molecular size of cell-free DNA in blood [J].
Chan, KCA ;
Yeung, SW ;
Lui, WB ;
Rainer, TH ;
Lo, YMD .
CLINICAL CHEMISTRY, 2005, 51 (04) :781-784
[5]  
Chang HW, 2002, JNCI-J NATL CANCER I, V94, P1697
[6]   Circulating mutant DNA to assess tumor dynamics [J].
Diehl, Frank ;
Schmidt, Kerstin ;
Choti, Michael A. ;
Romans, Katharine ;
Goodman, Steven ;
Li, Meng ;
Thornton, Katherine ;
Agrawal, Nishant ;
Sokoll, Lori ;
Szabo, Steve A. ;
Kinzler, Kenneth W. ;
Vogelstein, Bert ;
Diaz, Luis A., Jr. .
NATURE MEDICINE, 2008, 14 (09) :985-990
[7]   PLASMA DNA AS A MARKER OF CANCEROUS CELL-DEATH - INVESTIGATIONS IN PATIENTS SUFFERING FROM LUNG-CANCER AND IN NUDE-MICE BEARING HUMAN TUMORS [J].
FOURNIE, GJ ;
COURTIN, JP ;
LAVAL, F ;
CHALE, JJ ;
POURRAT, JP ;
PUJAZON, MC ;
LAUQUE, D ;
CARLES, P .
CANCER LETTERS, 1995, 91 (02) :221-227
[8]   Quantitation of circulating DNA in the serum of breast cancer patients by real-time PCR [J].
Gal, S ;
Fidler, C ;
Lo, YMD ;
Taylor, M ;
Han, C ;
Moore, J ;
Harris, AL ;
Wainscoat, JS .
BRITISH JOURNAL OF CANCER, 2004, 90 (06) :1211-1215
[9]   Circulating deoxyribonucleic acid as prognostic marker in non-small-cell lung cancer patients undergoing chemotherapy [J].
Gautschi, O ;
Bigosch, C ;
Huegli, B ;
Jermann, M ;
Marx, A ;
Chassé, E ;
Ratschiller, D ;
Weder, W ;
Joerger, M ;
Betticher, DC ;
Stahel, RA ;
Ziegler, A .
JOURNAL OF CLINICAL ONCOLOGY, 2004, 22 (20) :4157-4164
[10]   Cell-free DNA in human blood plasma: Length measurements in patients with pancreatic cancer and healthy controls [J].
Giacona, MB ;
Ruben, GC ;
Iczkowski, KA ;
Roos, TB ;
Porter, DM ;
Sorenson, GD .
PANCREAS, 1998, 17 (01) :89-97