Single-molecule fluorescence spectroscopy of biomolecular folding

被引:67
作者
Haran, G [1 ]
机构
[1] Weizmann Inst Sci, Dept Chem Phys, IL-76100 Rehovot, Israel
关键词
PANCREATIC TRYPSIN-INHIBITOR; SURFACE-PLASMON RESONANCE; ENERGY-TRANSFER; CONFORMATIONAL TRANSITIONS; STAPHYLOCOCCAL NUCLEASE; DISTANCE DISTRIBUTIONS; STRUCTURAL DYNAMICS; BROWNIAN-MOTION; RATE CONSTANTS; PROTEIN;
D O I
10.1088/0953-8984/15/32/201
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
Single-molecule fluorescence spectroscopy is emerging as an important tool for studying biomolecular folding dynamics. Its usefulness stems from its ability to directly map heterogeneities in folding pathways and to provide information about the energy landscape of proteins and ribonucleic acid (RNA) molecules. Single-molecule fluorescence techniques relevant for folding studies, including methods for trapping and immobilizing molecules, are described and compared in this review. Some emphasis is placed on fluorescence resonance energy transfer, which is particularly useful for studying conformational dynamics of biomolecules. Studies on protein and RNA folding using this methodology are reviewed and set in the more general context of folding science. Finally, some of the interesting future prospects in this field are delineated.
引用
收藏
页码:R1291 / R1317
页数:27
相关论文
共 137 条
  • [41] Integrated capillary electrophoresis on flexible silicone microdevices: Analysis of DNA restriction fragments and detection of single DNA molecules on microchips
    Effenhauser, CS
    Bruin, GJM
    Paulus, A
    Ehrat, M
    [J]. ANALYTICAL CHEMISTRY, 1997, 69 (17) : 3451 - 3457
  • [42] Data registration and selective single-molecule analysis using multi-parameter fluorescence detection
    Eggeling, C
    Berger, S
    Brand, L
    Fries, JR
    Schaffer, J
    Volkmer, A
    Seidel, CAM
    [J]. JOURNAL OF BIOTECHNOLOGY, 2001, 86 (03) : 163 - 180
  • [43] Crowding and hydration effects on protein conformation: A study with sol-gel encapsulated proteins
    Eggers, DK
    Valentine, JS
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2001, 314 (04) : 911 - 922
  • [44] Enderlein J., 1997, Bioimaging, V5, P88, DOI 10.1002/1361-6374(199709)5:3<88::AID-BIO2>3.3.CO
  • [45] 2-U
  • [46] Fersht A., 2017, World Sci., DOI [10.1142/10574, DOI 10.1142/10574]
  • [47] FOLDING AND BINDING - EDITORIAL OVERVIEW
    FERSHT, AR
    DILL, KA
    [J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (01) : 67 - 68
  • [48] THEORY OF COOPERATIVE TRANSITIONS IN PROTEIN MOLECULES .2. PHASE-DIAGRAM FOR A PROTEIN MOLECULE IN SOLUTION
    FINKELSTEIN, AV
    SHAKHNOVICH, EI
    [J]. BIOPOLYMERS, 1989, 28 (10) : 1681 - 1694
  • [49] Three-dimensional structural dynamics of myosin V by single-molecule fluorescence polarization
    Forkey, JN
    Quinlan, ME
    Shaw, MA
    Corrie, JET
    Goldman, YE
    [J]. NATURE, 2003, 422 (6930) : 399 - 404
  • [50] Protein structural dynamics by single-molecule fluorescence polarization
    Forkey, JN
    Quinlan, ME
    Goldman, YE
    [J]. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2000, 74 (1-2) : 1 - 35