Phylogeny and Evolution of Calcineurin B-Like (CBL) Gene Family in Grass and Functional Analyses of Rice CBLs

被引:18
作者
Jiang, Min [1 ,2 ]
Zhao, Changling [1 ]
Zhao, Mingfu [1 ]
Li, Yongzhong [1 ]
Wen, Guosong [1 ]
机构
[1] Yunnan Agr Univ, Coll Agron & Biotechnol, Res & Dev Ctr Heath Prod, Kunming 650201, Yunnan, Peoples R China
[2] Chinese Acad Sci, Shanghai Chenshan Plant Sci Res Ctr, Shanghai Chenshan Bot Garden, Shanghai 201602, Peoples R China
基金
中国国家自然科学基金;
关键词
Calcineurin B-like; Calcium signature; EF-hand; Grass; Evolution; Gene expression; GENOME-WIDE IDENTIFICATION; CALCIUM SENSORS CBL2; PROTEIN-KINASES; ION HOMEOSTASIS; EXPRESSION ANALYSIS; SIGNALING NETWORK; SALT TOLERANCE; ARABIDOPSIS; STRESS; MEMBRANE;
D O I
10.1007/s12374-020-09240-y
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Calcium signals play critical functions in regulating diverse arrays of plant growth and development and mediating a variety of biotic and abiotic stress responses as a second messenger. Calcineurin B-like (CBL) proteins were involved with plant-specific Ca(2+)signaling as calcium sensors. In this work, we retrieved 152 CBL gene members from 15 different grass species, surveyed their phylogenetic relationships and sequence features and also performed expression patterns and functional analyses of rice CBLs. Phylogenetic analysis indicated that grass CBLs fall into four different groups (Group A-D). Sequence analysis showed that CBL proteins harboring four conserved calcium-binding EF-hand have key amino acid residues Asp and Glu which had relatively high proportion in the average abundance. Molecular evolutionary analyses revealed that group A, B and C CBLs in their evolution process suffered the purifying selection, while group D CBLs were subjected to positive selection. Moreover, expression analyses showed significant divergent expression patterns of OsCBLs in various organs and under different hormones and abiotic stresses. Furthermore, tolerance analysis revealed that OsCBL3 and OsCBL8 overexpression transgenic rice seedlings improved salt tolerance and OsCBL5, OsCBL6 and OsCBL7 positively regulated drought stress. In general, the domain and base sequence of the CBL gene family is highly conserved in grasses. OsCBL genes had specific gene expression profiles and function in different stresses.
引用
收藏
页码:117 / 130
页数:14
相关论文
共 50 条
[41]   Hexokinase-mediated sugar signaling controls expression of the calcineurin B-like interacting protein kinase 15 gene and is perturbed by oxidative phosphorylation inhibition [J].
Yim, Hui-kyeong ;
Lim, Mi-na ;
Lee, Sung-eun ;
Lim, Jun ;
Lee, Yew ;
Hwang, Yong-sic .
JOURNAL OF PLANT PHYSIOLOGY, 2012, 169 (15) :1551-1558
[42]   Phylogeny, structural evolution and functional diversification of the plant PHOSPHATE1 gene family: a focus on Glycine max [J].
He, Lingli ;
Zhao, Man ;
Wang, Yan ;
Gai, Junyi ;
He, Chaoying .
BMC EVOLUTIONARY BIOLOGY, 2013, 13
[43]   Phylogeny, structural evolution and functional diversification of the plant PHOSPHATE1 gene family: a focus on Glycine max [J].
Lingli He ;
Man Zhao ;
Yan Wang ;
Junyi Gai ;
Chaoying He .
BMC Evolutionary Biology, 13
[44]   Comprehensive molecular evolution and gene expression analyses of the ABC1 atypical kinase family in rice and Arabidopsis [J].
Gao, Qingsong ;
Zang, Hui ;
Gao, Yun ;
Yang, Zefeng ;
Zhou, Yong ;
Luo, Yuming ;
Yuan, Yuan ;
Wang, Yifan ;
Yang, Liming ;
Xu, Xing ;
Wang, Jun ;
Xu, Chenwu ;
Liang, Guohua .
JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY, 2015, 24 (02) :210-217
[45]   The Brassica napus Calcineurin B-Like 1/CBL-interacting protein kinase 6 (CBL1/CIPK6) component is involved in the plant response to abiotic stress and ABA signalling [J].
Chen, Liang ;
Ren, Feng ;
Zhou, Li ;
Wang, Qing-Qing ;
Zhong, Hui ;
Li, Xue-Bao .
JOURNAL OF EXPERIMENTAL BOTANY, 2012, 63 (17) :6211-6222
[46]   The Effect of Stress Hormones, Ultraviolet C, and Stilbene Precursors on Expression of Calcineurin B-like Protein (CBL) and CBL-Interacting Protein Kinase (CIPK) Genes in Cell Cultures and Leaves of Vitis amurensis Rupr [J].
Kiselev, Konstantin V. ;
Aleynova, Olga A. ;
Ogneva, Zlata V. ;
Suprun, Andrey R. ;
Ananev, Alexey A. ;
Nityagovsky, Nikolay N. ;
Dneprovskaya, Alina A. ;
Beresh, Alina A. ;
Dubrovina, Alexandra S. .
PLANTS-BASEL, 2023, 12 (07)
[47]   Natural variation in the promoter of rice calcineurin B-like protein10 (OsCBL10) affects flooding tolerance during seed germination among rice subspecies [J].
Ye, Neng-Hui ;
Wang, Feng-Zhu ;
Shi, Lu ;
Chen, Mo-Xian ;
Cao, Yun-Ying ;
Zhu, Fu-Yuan ;
Wu, Yi-Zhen ;
Xie, Li-Juan ;
Liu, Tie-Yuan ;
Su, Ze-Zhuo ;
Xiao, Shi ;
Zhang, Hao ;
Yang, Jianchang ;
Gu, Hai-Yong ;
Hou, Xuan-Xuan ;
Hu, Qi-Juan ;
Yi, Hui-Juan ;
Zhu, Chang-Xiang ;
Zhang, Jianhua ;
Liu, Ying-Gao .
PLANT JOURNAL, 2018, 94 (04) :612-625
[48]   Molecular analyses of the rice tubby-like protein gene family and their response to bacterial infection [J].
Kou, Yanjun ;
Qiu, Deyun ;
Wang, Lei ;
Li, Xianghua ;
Wang, Shiping .
PLANT CELL REPORTS, 2009, 28 (01) :113-121
[49]   Molecular analyses of the rice tubby-like protein gene family and their response to bacterial infection [J].
Yanjun Kou ;
Deyun Qiu ;
Lei Wang ;
Xianghua Li ;
Shiping Wang .
Plant Cell Reports, 2009, 28
[50]   Pathogenic Leptospira Evolved a Unique Gene Family Comprised of Ricin B-Like Lectin Domain-Containing Cytotoxins [J].
Chaurasia, Reetika ;
Marroquin, Alan S. ;
Vinetz, Joseph M. ;
Matthias, Michael A. .
FRONTIERS IN MICROBIOLOGY, 2022, 13