Using the MWC model to describe heterotropic interactions in hemoglobin

被引:7
|
作者
Rapp, Olga
Yifrach, Ofer [1 ]
机构
[1] Ben Gurion Univ Negev, Dept Life Sci, Beer Sheva, Israel
来源
PLOS ONE | 2017年 / 12卷 / 08期
基金
以色列科学基金会;
关键词
OXYGEN DISSOCIATION CURVE; 2-STATE ALLOSTERIC MODEL; SINGLE-CRYSTALS; FOURIER SYNTHESIS; SILICA-GELS; BINDING; COOPERATIVITY; CHANGEUX; MONOD; WYMAN;
D O I
10.1371/journal.pone.0182871
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Hemoglobin is a classical model allosteric protein. Research on hemoglobin parallels the development of key cooperativity and allostery concepts, such as the 'all-or-none' Hill formalism, the stepwise Adair binding formulation and the concerted Monod-Wymann-Changuex (MWC) allosteric model. While it is clear that the MWC model adequately describes the cooperative binding of oxygen to hemoglobin, rationalizing the effects of H+, CO2 or organophosphate ligands on hemoglobin-oxygen saturation using the same model remains controversial. According to the MWC model, allosteric ligands exert their effect on protein function by modulating the quaternary conformational transition of the protein. However, data fitting analysis of hemoglobin oxygen saturation curves in the presence or absence of inhibitory ligands persistently revealed effects on both relative oxygen affinity (c) and conformational changes (L), elementary MWC parameters. The recent realization that data fitting analysis using the traditional MWC model equation may not provide reliable estimates for L and c thus calls for a re-examination of previous data using alternative fitting strategies. In the current manuscript, we present two simple strategies for obtaining reliable estimates for MWC mechanistic parameters of hemoglobin steady-state saturation curves in cases of both evolutionary and physiological variations. Our results suggest that the simple MWC model provides a reasonable description that can also account for heterotropic interactions in hemoglobin. The results, moreover, offer a general roadmap for successful data fitting analysis using the MWC model.
引用
收藏
页数:15
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