Separation and identification of oligonucleotides by hydrophilic interaction liquid chromatography (HILIC)-inductively coupled plasma mass spectrometry (ICPMS)

被引:53
作者
Easter, Renee N. [1 ]
Kroening, Karolin K. [1 ]
Caruso, Joseph A. [1 ]
Limbach, Patrick A. [2 ]
机构
[1] Univ Cincinnati, Dept Chem, Agilent Technol Metall Ctr Amer, Cincinnati, OH 45221 USA
[2] Univ Cincinnati, Dept Chem, Rieveschl Labs Mass Spectrometry, Cincinnati, OH 45221 USA
基金
美国国家卫生研究院;
关键词
NUCLEIC-ACIDS; PROTEIN-PHOSPHORYLATION; SPECIATION ANALYSIS; SELENIUM; PHASE; PHOSPHORUS; CISPLATIN; SAMPLES; HPLC;
D O I
10.1039/c0an00399a
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
A method for the separation and detection of oligonucleotides utilizing hydrophilic interaction liquid chromatography (HILIC) with inductively coupled plasma mass spectrometry (ICPMS) is described. Polythymidylic acids of various lengths (10, 15, 20 and 30 nucleotides) were separated under gradient HILIC conditions. Selective detection of oligonucleotides was possible through monitoring m/z 47, corresponding to (PO+)-P-31-O-16, using ICPMS. Oxygen was used as a reaction gas in the collision/reaction cell to produce PO+ by reacting with phosphorus in the gas phase, thereby effectively eliminating the interferences for phosphorus normally seen at m/z 31. Limits of detections (LODs) were determined to be 1.69 pmol, 1.21 pmol, 1.0 pmol and 0.55 pmol loaded on column for the 10, 15, 20 and 30 mer, respectively.
引用
收藏
页码:2560 / 2565
页数:6
相关论文
共 32 条
[1]   Elucidating the selenium and arsenic metabolic pathways following exposure to the non-hyperaccumulating Chlorophytum comosum, spider plant [J].
Afton, Scott E. ;
Catron, Brittany ;
Caruso, Joseph A. .
JOURNAL OF EXPERIMENTAL BOTANY, 2009, 60 (04) :1289-1297
[2]   HYDROPHILIC-INTERACTION CHROMATOGRAPHY FOR THE SEPARATION OF PEPTIDES, NUCLEIC-ACIDS AND OTHER POLAR COMPOUNDS [J].
ALPERT, AJ .
JOURNAL OF CHROMATOGRAPHY, 1990, 499 :177-196
[3]   Electrostatic repulsion hydrophilic interaction chromatography for isocratic separation of charged solutes and selective isolation of phosphopeptides [J].
Alpert, Andrew J. .
ANALYTICAL CHEMISTRY, 2008, 80 (01) :62-76
[4]   New procedure for the use of high-performance liquid chromatography electrospray ionization mass spectrometry for the analysis of nucleotides and oligonucleotides [J].
Apffel, A ;
Chakel, JA ;
Fischer, S ;
Lichtenwalter, K ;
Hancock, WS .
JOURNAL OF CHROMATOGRAPHY A, 1997, 777 (01) :3-21
[5]   Analysis of oligonucleotides by HPLC-electrospray ionization mass spectrometry [J].
Apffel, A ;
Chakel, JA ;
Fischer, S ;
Lichtenwalter, K ;
Hancock, WS .
ANALYTICAL CHEMISTRY, 1997, 69 (07) :1320-1325
[6]   Detection of ultratrace phosphorus and sulfur by quadrupole ICPMS with dynamic reaction cell [J].
Bandura, DR ;
Baranov, VI ;
Tanner, SD .
ANALYTICAL CHEMISTRY, 2002, 74 (07) :1497-1502
[7]   Determination of phosphorus in small amounts of protein samples by ICP-MS [J].
Becker, JS ;
Boulyga, SF ;
Pickhardt, C ;
Becker, J ;
Buddrus, S ;
Przybylski, M .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2003, 375 (04) :561-566
[8]   Speciation analysis of selenium metabolites in yeast-based food supplements by ICPMS -: Assisted hydrophilic interaction HPLC -: Hybrid linear ion trap/orbitrap MSn [J].
Dernovics, Mihaly ;
Lobinski, Ryszard .
ANALYTICAL CHEMISTRY, 2008, 80 (11) :3975-3984
[9]   Studying Protein Phosphorylation in Low MW CSF Fractions with capLC-ICPMS and nanoLC-CHIP-ITMS for Identification of Phosphoproteins [J].
Ellis, Jenny ;
Grimm, Rudolf ;
Clark, Joseph F. ;
Pyne-Gaithman, Gail ;
Wilbur, Steve ;
Caruso, Joseph A. .
JOURNAL OF PROTEOME RESEARCH, 2008, 7 (11) :4736-4742
[10]   SIMPLE APPROACH TO REDUCING POLYATOMIC ION INTERFERENCES ON ARSENIC AND SELENIUM IN INDUCTIVELY COUPLED PLASMA MASS-SPECTROMETRY [J].
EVANS, EH ;
EBDON, L .
JOURNAL OF ANALYTICAL ATOMIC SPECTROMETRY, 1989, 4 (03) :299-300