A user's guide to channelrhodopsin variants: features, limitations and future developments

被引:240
作者
Lin, John Y. [1 ]
机构
[1] Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
关键词
GREEN-ALGAE; EXCITABLE CELLS; OPTICAL CONTROL; CHANNEL; PHOTOCYCLE; ACTIVATION; RESPONSES;
D O I
10.1113/expphysiol.2009.051961
中图分类号
Q4 [生理学];
学科分类号
071003 ;
摘要
Channelrhodopsins (ChRs) are light-activated channels from algae that provide these organisms with fast sensors to visible light for phototaxis. Since its discovery, channelrhodopsin-2 (ChR2) has been used as a research tool to depolarize membranes of excitable cells with light. Subsequent chimeragenesis, mutagenesis and bioinformatic approaches have introduced additional ChR variants, such as channelrhodopsin-2 with H134R mutation (ChR2/H134R), channelrhodopsin-2 with E123T mutation (ChETA), Volvox carteri channelrhodopsin-1 (VChR1), Volvox carteri channelrhodopsin-2 (VChR2), channelrhodopsin-2 with C128 or D156A mutations (ChR2/C128X/D156A), chimera D (ChD), chimera EF (ChEF) and chimera EF with I170V mutation (I170V). Each of these ChR variuants has unique features and limitations, but there are few resources summarizing and comparing these ChRs in a systematic manner. In this review, the seven following key properties of ChRs that have significant influences on their effectiveness as research tools are examined: conductance, selectivity, kinetics, desensitization, light sensitivity, spectral response and membrane trafficking. Using this information, valuable qualities and deficits of each ChR variant are summarized. Optimal uses and potential future improvements of ChRs as optogenetic tools are also discussed.
引用
收藏
页码:19 / 25
页数:7
相关论文
共 20 条
[1]   Spectral characteristics of the photocycle of channelrhodopsin-2 and its implication for channel function [J].
Bamann, Christian ;
Kirsch, Taryn ;
Nagel, Georg ;
Bamberg, Ernst .
JOURNAL OF MOLECULAR BIOLOGY, 2008, 375 (03) :686-694
[2]   Structural Guidance of the Photocycle of Channelrhodopsin-2 by an Interhelical Hydrogen Bond [J].
Bamann, Christian ;
Gueta, Ronnie ;
Kleinlogel, Sonja ;
Nagel, Georg ;
Bamberg, Ernst .
BIOCHEMISTRY, 2010, 49 (02) :267-278
[3]   Bi-stable neural state switches [J].
Berndt, Andre ;
Yizhar, Ofer ;
Gunaydin, Lisa A. ;
Hegemann, Peter ;
Deisseroth, Karl .
NATURE NEUROSCIENCE, 2009, 12 (02) :229-234
[4]   Channelrhodopsin-1 initiates phototaxis and photophobic responses in Chlamydomonas by immediate light-induced depolarization [J].
Berthold, Peter ;
Tsunoda, Satoshi P. ;
Ernst, Oliver P. ;
Mages, Wolfgang ;
Gradmann, Dietrich ;
Hegemann, Peter .
PLANT CELL, 2008, 20 (06) :1665-1677
[5]   Millisecond-timescale, genetically targeted optical control of neural activity [J].
Boyden, ES ;
Zhang, F ;
Bamberg, E ;
Nagel, G ;
Deisseroth, K .
NATURE NEUROSCIENCE, 2005, 8 (09) :1263-1268
[6]   Photoactivation of channelrhodopsin [J].
Ernst, Oliver P. ;
Murcia, Pedro A. Sanchez ;
Daldrop, Peter ;
Tsunoda, Satoshi P. ;
Kateriya, Suneel ;
Hegemann, Peter .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (03) :1637-1643
[7]   Channelrhodopsin-2 is a leaky proton pump [J].
Feldbauer, Katrin ;
Zimmermann, Dirk ;
Pintschovius, Verena ;
Spitz, Julia ;
Bamann, Christian ;
Bamberg, Ernst .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (30) :12317-12322
[8]   Ultrafast optogenetic control [J].
Gunaydin, Lisa A. ;
Yizhar, Ofer ;
Berndt, Andre ;
Sohal, Vikaas S. ;
Deisseroth, Karl ;
Hegemann, Peter .
NATURE NEUROSCIENCE, 2010, 13 (03) :387-U27
[9]   Kinetic evaluation of photosensitivity in genetically engineered neurons expressing green algae light-gated channels [J].
Ishizuka, T ;
Kakuda, M ;
Araki, R ;
Yawo, H .
NEUROSCIENCE RESEARCH, 2006, 54 (02) :85-94
[10]   Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopin and green algae channelrhodopsin [J].
Li, X ;
Gutierrez, DV ;
Hanson, MG ;
Han, J ;
Mark, MD ;
Chiel, H ;
Hegemann, P ;
Landmesser, LT ;
Herlitze, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (49) :17816-17821